Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., transport system permease protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  149 bits (376), Expect = 1e-40
 Identities = 113/355 (31%), Positives = 176/355 (49%), Gaps = 35/355 (9%)

Query: 32  RRNIAVALVLSLIVLALMILATCVGKLPISISDVTAILL------------GEVTSGFKR 79
           RR + + L+ +L   A ++LA   G   I++ DV   L             G        
Sbjct: 22  RRTLRIILLAALCWAATVVLACLFGPFHIAVGDVLRALAELALPGGLADGAGATPDATHM 81

Query: 80  QVLLDIRLPRIFTALFAGAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFS 139
            V+  IRL R+  AL AG  L ++G +FQ + RNPL  P  +G + GAA GA L + L  
Sbjct: 82  LVVTRIRLARVCLALLAGGGLAVAGTVFQGVLRNPLADPFTLGVSGGAAFGASLALTLGI 141

Query: 140 GSGVA-----------------VVFSAIAGGVMTAIAVYLLS-VKSGTVGRYRLVLTGIG 181
           G   A                 +  +A+AG + +  AV LL     G   R  +VL G+ 
Sbjct: 142 GPLAAWLTMHLPAFAALSPQALLPLAALAGALASLGAVLLLGGAAGGGFRRETVVLAGVV 201

Query: 182 VGSVLTALNGLLLVKGSLDSAITANL-WLSGSLHAREWSHVFPVMCGVLVLLPLIKSLAR 240
           V +VL+AL  + LVK   + ++++ + W+ GSL  R W+H   ++  + + L L+    R
Sbjct: 202 VSTVLSAL--VSLVKALDEESVSSIVFWIMGSLQGRGWAHAAVLLPWLALGLLLVLPRFR 259

Query: 241 SLQMLEMGDEIARQLGVVVEPIRLFMILAAVTLAALATGAAGPIAFIALAAPQLAARLRQ 300
            L +L +GD  ARQLG+    +RL +++ A  + A     +G I F+ L  P LA     
Sbjct: 260 ELDILALGDVQARQLGMDTARVRLQLLVGASLITAGCVAVSGVIGFVGLVVPHLARMRLG 319

Query: 301 TANIPLVSAGLMGACLLLG-ADLLTQ-WMPLALTLPIGRITGLVGGMYLLILLMR 353
            A+ PL++AG  G  +LL  AD+L +  +P    LP+G +T L+GG +  +LL+R
Sbjct: 320 AAHGPLLAAGWFGGGVLLAWADVLARTLLPGGAELPVGVVTALLGGPFFCLLLVR 374