Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., iron ABC transporter permease from Methanococcus maripaludis JJ

 Score =  125 bits (314), Expect = 2e-33
 Identities = 102/346 (29%), Positives = 153/346 (44%), Gaps = 29/346 (8%)

Query: 26  YTLRVERRNIAVALVLSLIVLALMILATCVGKLPISISDVTAILLGEVTSGFKRQVLLDI 85
           YTL+     +    VL + ++ + I A C G   +SIS +   LLG   +     V+ +I
Sbjct: 11  YTLK----KLIFGFVLIIALIIISIYALCTGDFQLSISQIINSLLGSGDAS-SNLVIWNI 65

Query: 86  RLPRIFTALFAGAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFSGSGV-- 143
           RLPRIF A+  G  L +SGA+ Q + RNPL SP  +G + GA  GA + II     G   
Sbjct: 66  RLPRIFAAILCGIGLSVSGAVMQCVLRNPLASPYTMGISHGAMFGACVAIITLGIGGAES 125

Query: 144 ----------AVVFSAIAGGVMTAIAVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNGLL 193
                     ++   A  G ++   AV +L+   G +    +VL G+ + S+ TA   L+
Sbjct: 126 TGHIAINNPYSITIFAFLGSLLGVCAVLVLAKLKG-LSPEAMVLAGVAISSLFTAATTLI 184

Query: 194 LVKGSLDSAITANLWLSGSLHAREWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIAR 253
                         W  G L    W  V  +     V L            LE G+E A+
Sbjct: 185 QYFADDMQLAAMVYWSFGDLGRPLWPEVKIMALVAFVSLIYFIHKRWDYNALESGEETAK 244

Query: 254 QLGVVVEPIRLFMILAAVTLAALATGAAGPIAFIALAAPQLAARLRQTAN------IPLV 307
            LGV  + IRL  +L A  + ++     G I F+ L  P +   +R T        IPL 
Sbjct: 245 SLGVNTDKIRLSGMLVASLVTSVCVAFLGIIGFVGLICPHI---IRITVGGDYRYLIPLC 301

Query: 308 SAGLMGACLLLGADLLTQWMPLALTLPIGRITGLVGGMYLLILLMR 353
           S  + GA L+L AD + + +   + LP+G +T  +G    L LL +
Sbjct: 302 S--IFGAVLVLLADTIARTIISPIILPVGILTSFLGAPMFLYLLTK 345