Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., iron compound ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  139 bits (349), Expect = 1e-37
 Identities = 110/349 (31%), Positives = 174/349 (49%), Gaps = 27/349 (7%)

Query: 29  RVERRNIAVALVLSLIVLALMILATCV-GKLPISISDVTAIL---LGEVTSGFKRQVLL- 83
           R+ RR    AL L   +  L + A C+ G   I  ++V  +L    G   SG    + L 
Sbjct: 3   RIRRRT---ALALGAALWLLSVPAACLFGPFDIGPAEVMRLLGAAAGVPVSGHVDPIRLL 59

Query: 84  ---DIRLPRIFTALFAGAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFSG 140
              DIRL R+  +L  G  L ++G +FQ + RNPL  P  +G +SGAA GA + I     
Sbjct: 60  VVGDIRLARVCLSLLVGGGLAMAGVVFQGVLRNPLADPFTLGVSSGAALGASVAISFGVT 119

Query: 141 SGVAVVFSAIAG-GVMTAIAVY----------LLSVKSGTVGRYRLVLTGIGVGSVLTAL 189
              AV  + +AG GV+T  A++          LL   +G+  R  +VL G+ V + L AL
Sbjct: 120 LPAAVAPALVAGLGVVTPAALFGAFAALSLVLLLGTAAGSFRRETVVLAGVVVSTFLAAL 179

Query: 190 NGLLLVKGSLDSAITANL-WLSGSLHAREWSHVFPVMCGVLVLLPLIKSLARSLQMLEMG 248
             + LVK   + ++++ + W+ GSL  R W+H   ++  +++ L  +   AR L +L +G
Sbjct: 180 --VSLVKALDEESVSSIVFWIMGSLQGRGWAHTAVLLPPLVLGLAAVVRHARDLDVLALG 237

Query: 249 DEIARQLGVVVEPIRLFMILAAVTLAALATGAAGPIAFIALAAPQLAARLRQTANIP-LV 307
           D  A QLG+    +R  ++  A  + A     +G I F+ L  P L   +   A+ P L+
Sbjct: 238 DTQASQLGMRTGYVRCVLLCGASCITAGCVAVSGVIGFVGLVVPHLLRLVLGAAHGPLLI 297

Query: 308 SAGLMGACLLLGADLLTQ-WMPLALTLPIGRITGLVGGMYLLILLMRSK 355
            A   G  LLL +D++ +  +     LP+G +T LVGG +  +LL R +
Sbjct: 298 GAWFGGGILLLWSDVVARTLLSGGAELPVGVVTALVGGPFFCLLLQREQ 346