Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., transport system permease protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  135 bits (339), Expect = 2e-36
 Identities = 101/333 (30%), Positives = 161/333 (48%), Gaps = 26/333 (7%)

Query: 40  VLSLIVLALMI-LATCVGKLPISISDVTAILLGEVTSGF--------KRQVLLDIRLPRI 90
           V  + VL L I +A  +G + + +  V  I+   +  G         +  ++ +IRLPR 
Sbjct: 21  VAGVAVLLLSISVAVSLGAVAVPLGTVWGIMADRILPGLLTPDWTTGQAAIVWEIRLPRA 80

Query: 91  FTALFAGAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQII---LFSGSGVAVVF 147
             A   GA L L GA  QS++RNPL  P ++G +SGAA GA+L ++   LF G  + V  
Sbjct: 81  LLAAMVGAGLALVGASLQSVTRNPLADPHLLGISSGAAFGAILALLHTGLFLGL-LTVPL 139

Query: 148 SAIAGGVMTAIAVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNGLLLVKGSLDSAITANL 207
            A AG +   + V  ++  +   G  RLVL G+ V  ++ +   +L+  G   +  T   
Sbjct: 140 LAFAGALAATLLVLGVTSFAQATGADRLVLAGVAVSFIVMSCANILIFIGDPRATHTVVF 199

Query: 208 WLSGSLHAREWSH-VFP----VMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVVVEPI 262
           W+ G L   +W   +FP    V CG+  L     + A  L  + +GDE A  LG+ +   
Sbjct: 200 WMLGGLGLAQWDQLLFPAVILVGCGLWFL-----ANASRLNAMTIGDETASTLGIPIARF 254

Query: 263 RLFMILAAVTLAALATGAAGPIAFIALAAPQLAARL--RQTANIPLVSAGLMGACLLLGA 320
           RL + +    L       +G I F+ L  P +   L     A + L ++ L+GA  L+ A
Sbjct: 255 RLSVFVVGALLTGCMVAFSGIIGFVGLMIPHIVRMLVGGDYARV-LPASALVGAIFLVWA 313

Query: 321 DLLTQWMPLALTLPIGRITGLVGGMYLLILLMR 353
           D+  + +     +PIG +TGL+GG + + LL R
Sbjct: 314 DIAARTVMAPEDIPIGIVTGLIGGAFFVWLLRR 346