Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Fe3+ ABC transporter, permease protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  127 bits (318), Expect = 5e-34
 Identities = 97/328 (29%), Positives = 164/328 (50%), Gaps = 12/328 (3%)

Query: 33  RNIAVALVLSLIVLALMILATCVGKLPISISDVTAILLGEVTSGFKRQVLLDIRLPRIFT 92
           R+  +  +L  + + L +L   VG + I I DV A L G   S    +++L+IRL +   
Sbjct: 4   RSTILFSILITLTVGLFLLDLAVGAVNIPIRDVWAALTGGNCSRATEKIVLNIRLIKAIV 63

Query: 93  ALFAGAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFSGSGVAVVFSAIAG 152
           AL AGAAL +SG   Q++ RNPL  P ++G +SGA+ G  L ++   GS + +  +A  G
Sbjct: 64  ALLAGAALSVSGLQMQTLFRNPLAGPYVLGISSGASLGVALVVLAGIGSSIGIAGAAWVG 123

Query: 153 GVMTAIAVYLLS--VKSGTVGRYRLVLTGIGVGSVLTALNGLLLVKGSLDSAITANLWLS 210
             +  + +  +   +K   V     ++   GVG+V+  L   L  + SL + +   +W  
Sbjct: 124 AAVVLLVITAVGQRIKDIMVILILGMMFSSGVGAVVQILQ-YLSKEESLKAFV---IWTM 179

Query: 211 GSLHAREWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVVVEPIRLFMILAA 270
           G+L       +  ++  V   L L     + L +L  G+E A  +G+ +   R  + L+ 
Sbjct: 180 GALGDVTSGQLLILVPSVFAGLLLAVLTIKPLNLLLFGEEYAVTMGLNIRRSRSLLFLST 239

Query: 271 VTLAALATGAAGPIAFIALAAPQLAARLRQTANIPLVSAG--LMGACLLLGADLLTQWMP 328
             LA   T   GPI FI LA P +   L Q ++  ++  G  L GA +LL  D++++   
Sbjct: 240 TLLAGTITAFCGPIGFIGLAMPHVTRMLFQNSDHHVLLPGTILSGASILLLCDIISK--- 296

Query: 329 LALTLPIGRITGLVGGMYLLILLMRSKN 356
              TLPI  IT L+G   ++ +++R+K+
Sbjct: 297 -IFTLPINAITALLGIPIVVWVVLRNKS 323