Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., Vitamin B12 transporter, permease component (fecCD-like) (from data) from Shewanella sp. ANA-3

 Score =  146 bits (368), Expect = 1e-39
 Identities = 101/354 (28%), Positives = 165/354 (46%), Gaps = 38/354 (10%)

Query: 39  LVLSLIVLALM--ILATCVGKLPISISDVTAILLGE----------VTSGFKRQVLLDIR 86
           L+L L   AL+  I A   G   IS  DV  + + +          V++    ++++++R
Sbjct: 26  LILGLAGFALLTPIAAASFGAANISFLDVLQVFINKLSHLFMADEAVSTSMTERIVMELR 85

Query: 87  LPRIFTALFAGAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFSGSGV--- 143
           LPRI  A  AGA L L+G++ Q+++RNPL  P + G +SGA+ GA++ + LF+GSG+   
Sbjct: 86  LPRIILAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFTGSGLFGN 145

Query: 144 ----------------------AVVFSAIAGGVMTAIAVYLLSVKSGTVGRYRLVLTGIG 181
                                 ++ F A  G  ++ + V  L+         R++L+G+ 
Sbjct: 146 AGTIANSGIFSGSGTFAGLLWFSLPFGAFIGASLSVLIVLALAGLGLKSQVERMLLSGVA 205

Query: 182 VGSVLTALNGLLLVKGSLDSAITANLWLSGSLHAREWSHVFPVMCGVLVLLPLIKSLARS 241
              + +AL  LLL   S  +  +   W  GS     WS +      VL+   +I    R 
Sbjct: 206 TSFMFSALTSLLLYFASPQATASVLFWSLGSFAKASWSLLVLPSLVVLLSFFIILGWKRQ 265

Query: 242 LQMLEMGDEIARQLGVVVEPIRLFMILAAVTLAALATGAAGPIAFIALAAPQLAARLRQT 301
           +  L+ GDE A  LGV V  +RL M+L    + A+     G I F+ L  P    RL   
Sbjct: 266 IMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPH-TVRLLFP 324

Query: 302 ANIPLVSAGLMGACLLLGADLLTQWMPLALTLPIGRITGLVGGMYLLILLMRSK 355
              P++   L+G   ++  D+L + +     LP+G IT  +G  + L++L R K
Sbjct: 325 GRQPILLTALVGGLFMVWIDVLARCLLGNQELPVGIITAAIGSFFFLLILRRRK 378