Pairwise Alignments

Query, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., transport system permease protein (RefSeq) from Shewanella sp. ANA-3

 Score =  137 bits (345), Expect = 4e-37
 Identities = 95/325 (29%), Positives = 164/325 (50%), Gaps = 9/325 (2%)

Query: 41  LSLIVLALMILATCVGKLPISISDVTAILLGEVT-------SGFKRQVLLDIRLPRIFTA 93
           ++ +++   +L+  VG + IS+ D  + +    T       +  ++ V+ ++RLPR   A
Sbjct: 11  MATLLILSSLLSVSVGPVNISLIDSLSAVFNWATEQNIGNLAPHEQLVVSNVRLPRTLLA 70

Query: 94  LFAGAALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILF-SGSGVAVVFSAIAG 152
           L  GA L   GA+ Q + RNPL  P IIG +SGAA GA + I+ F     V +  SA + 
Sbjct: 71  LAVGAMLAQCGAVMQGLFRNPLADPGIIGVSSGAALGAAICIVQFPHAESVMISVSAFSS 130

Query: 153 GVMTAIAVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNGLLLVKGSLDSAITANLWLSGS 212
           G++T + VY L+  +       L+L+G+ V ++  A  G+L    +  +     LW  GS
Sbjct: 131 GLITTLIVYRLASSALGTSVVLLLLSGVAVAALAGAGIGVLTYLANDMALRDLTLWQMGS 190

Query: 213 LHAREWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVVVEPIRLFMILAAVT 272
           +   +W +V   +  + +L       A++L  L +G+  AR LG+ V+ ++L +IL    
Sbjct: 191 IAGAQWQYVGLCLVVLALLSWQFNRDAKALNALLLGEAEARHLGIDVDSLKLRLILLCAL 250

Query: 273 LAALATGAAGPIAFIALAAPQLAARLRQTANIPLV-SAGLMGACLLLGADLLTQWMPLAL 331
              ++  A G I FI L  P L   L    +  L+  + L+GA LL  AD+  +      
Sbjct: 251 GVGVSVAATGIIGFIGLVVPHLVRMLLGPDHQRLLPMSALLGAALLALADIGARAFLPPA 310

Query: 332 TLPIGRITGLVGGMYLLILLMRSKN 356
            LP+G +T L+G  + + LL++ ++
Sbjct: 311 ELPVGLVTALIGAPFFIFLLLQQRS 335