Pairwise Alignments

Query, 350 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  120 bits (300), Expect = 7e-32
 Identities = 93/323 (28%), Positives = 154/323 (47%), Gaps = 10/323 (3%)

Query: 29  LMLVALMGLTISSVFVGSRDIPYAVTFD----ALFHFDEQNTQHLLVHY-LRVPRTGLAI 83
           L+L  L  L I SV +     P   + D    ALF  D  + Q  +V + +R+P   +A+
Sbjct: 24  LILGGLTLLLICSVLLDLALGPARYSLDEVLGALFSPDSASPQVRVVMWDIRLPVALMAV 83

Query: 84  LVGAALGAAGVIMQAMTRNPLADPGILGVNA----GAILMVVIGIAGFGLTDMLHYLWFG 139
            VGAAL  AG  MQ +  NPLA P  LG++A    GA + +  G+A F L          
Sbjct: 84  AVGAALSLAGAQMQTILNNPLASPFTLGISAAASFGAAMGLAFGVALFPLAAQYMVPVNA 143

Query: 140 LFGAAATSVGVYLLAGINQSPNPVRVVLAGAAMTVVLLSMTHLIMLNSAQEVFNQFRHWS 199
              A  +++ ++ L+ + +      +VL G A+     ++  L+   + ++       W+
Sbjct: 144 FIMAMLSALLIHFLS-LRRGVTAETIVLLGIALVFTFNALLALVQFFATEQAVAAVVFWT 202

Query: 200 IGSLQGRGYEVLLPTSVFVLLGLIAAILLARGLDTVVLGHDAGKALGVNPLWIWIASAAV 259
           +GSL    +  L    + +L+ L      A  L  + LG D   + G+N   +   +  +
Sbjct: 203 MGSLTKATWPKLGVICLVILVTLPIFARRAWALTALRLGDDKAASFGINVRSLRFQTLIM 262

Query: 260 VTLLAGTATAAAGPISFLGLTAPHLARLWVGAEHRRLLPYSMLLGALLLLGADLAGRLIG 319
           V+LLA    A  G I F+GL  PH+AR+ +G + R  LP S+L GAL+L  + +  + + 
Sbjct: 263 VSLLASFPVAFVGTIGFIGLVGPHIARMLIGEDQRFFLPASLLTGALILSASSVISKTLI 322

Query: 320 SNDEISAGIMVALIGGPVFVLLV 342
                  G++ +LIG P F+ L+
Sbjct: 323 PGAIFPIGVVTSLIGVPFFISLI 345