Pairwise Alignments

Query, 350 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., ABC-type Fe3+-siderophore transport system, permease component from Pseudomonas fluorescens FW300-N2E2

 Score =  223 bits (568), Expect = 5e-63
 Identities = 137/320 (42%), Positives = 190/320 (59%), Gaps = 5/320 (1%)

Query: 25  WLMGLMLVALMGLTISSVFVGSRDIPYAVTFDALFHFDEQNTQHLLVHYLRVPRTGLAIL 84
           WL  LM +AL  L    + VG++DIP+   + AL  +   N    ++   R+PR  +A+L
Sbjct: 4   WLGLLMAIALTSLL--HLAVGAKDIPWQEAWQALVAYAPGNPDQSVIRGSRLPRLLVAML 61

Query: 85  VGAALGAAGVIMQAMTRNPLADPGILGVNAGAILMVVIGIAGFGLTDMLHYLWFGLFGAA 144
           VGA+LG AG IMQA+  NPLADPGILG+N+GA L VV G+      DM     F   GA 
Sbjct: 62  VGASLGLAGAIMQAVGDNPLADPGILGINSGAALFVVFGLLVLPGNDMSMIPLFAFAGAL 121

Query: 145 ATSVGVYLLAGINQSPNPVRVVLAGAAMTVVLLSMTHLIMLNSAQEVFNQFRHWSIGSLQ 204
             SVGV LLAG  +  NP+R+ L+GA +  +  ++T +++L   Q+  +  R W  GS+ 
Sbjct: 122 VASVGVLLLAG--RGHNPIRLTLSGAMIAALFSAITSILLLLD-QQGLDSLRRWLTGSIG 178

Query: 205 GRGYEVLLPTSVFVLLGLIAAILLARGLDTVVLGHDAGKALGVNPLWIWIASAAVVTLLA 264
             G  +      +VLLG+   ++  R L+   LG  A   +GVN L + +   A V LL+
Sbjct: 179 VTGGSMQAWVWPYVLLGMCLCLVNVRALNAHRLGPQAAAGMGVNLLKMRVLGLASVVLLS 238

Query: 265 GTATAAAGPISFLGLTAPHLARLWVGAEHRRLLPYSMLLGALLLLGADLAGRLIGSNDEI 324
           G A A AGPI F+GL  PH ARL  G ++RRLL  + LLGALLL+ AD+A R +    E+
Sbjct: 239 GGAVALAGPIGFVGLVVPHAARLLFGDDYRRLLLAAPLLGALLLILADIAARTVVRPFEL 298

Query: 325 SAGIMVALIGGPVFVLLVRR 344
           + GI+ ALIGGP+FV+LV R
Sbjct: 299 NTGIVTALIGGPIFVVLVLR 318