Pairwise Alignments

Query, 350 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

 Score =  144 bits (362), Expect = 4e-39
 Identities = 102/330 (30%), Positives = 160/330 (48%), Gaps = 16/330 (4%)

Query: 25  WLMGLMLVALMGLTISSVFVGSRDIPYAVTFDALFH------FDEQNTQHLLVHYLRVPR 78
           W+  ++++A+M        +G   I   V F  L +      +        +V   R+ R
Sbjct: 12  WVSAVLVLAIM----IGAAIGETSISLQVVFQVLANKLWAASYVLDPIDEGIVWNYRLTR 67

Query: 79  TGLAILVGAALGAAGVIMQAMTRNPLADPGILGVNAGAIL-MVVIGIAGFGLTDMLHYLW 137
             +A   GA L   GV++Q++ RNPLADP +LG++AGA    V++ I GFG   +   + 
Sbjct: 68  AIVAAACGAGLAICGVVLQSLLRNPLADPYLLGISAGASTGAVLVAILGFGAGAIS--MS 125

Query: 138 FGLF-GAAATSVGVYLLAGINQSPNPV-RVVLAGAAMTVVLLSMTHLIMLNSAQ-EVFNQ 194
            G F GA A    V LLA  ++      +++LAG A + +  ++T  ++  SA  E    
Sbjct: 126 AGAFVGAVAAFSLVALLAHSSRGTTAAGQIILAGIAGSQLFNALTSFLITKSASSEQARG 185

Query: 195 FRHWSIGSLQGRGYEVLLPTSVFVLLGLIAAILLARGLDTVVLGHDAGKALGVNPLWIWI 254
              W +G+L G  +  +      VL+GL+  +   R LD    G D+  +LG+    + I
Sbjct: 186 IMFWLLGNLSGVRWHSVWLAVPTVLVGLLVCLWHRRALDAFTFGSDSAASLGIAVRRVQI 245

Query: 255 ASAAVVTLLAGTATAAAGPISFLGLTAPHLARLWVGAEHRRLLPYSMLLGALLLLGADLA 314
                  L+     +  G I F+GL  PH  R+ VG  H RL+P S L GAL L+ AD+ 
Sbjct: 246 ILITTAALVTAVMVSIVGSIGFVGLVIPHAVRMLVGVRHARLVPLSALSGALFLIAADIL 305

Query: 315 GRLIGSNDEISAGIMVALIGGPVFVLLVRR 344
            R +     +  G++ ALIG PVF L++ R
Sbjct: 306 SRTLIKGQALPIGVITALIGAPVFALILTR 335