Pairwise Alignments

Query, 350 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

 Score =  190 bits (482), Expect = 5e-53
 Identities = 120/320 (37%), Positives = 181/320 (56%), Gaps = 11/320 (3%)

Query: 29  LMLVALMGLTISS--VFVGSRDIPYAVTF-DALFHFDEQNTQHLLVHYLRVPRTGLAILV 85
           L+LVA MGL++++   ++   DI  +V   DAL        +H+L+   R+ RT +A+ V
Sbjct: 12  LILVACMGLSLATGATWISPADIVRSVWQPDAL-----SAIEHVLLD-TRLTRTLMAVAV 65

Query: 86  GAALGAAGVIMQAMTRNPLADPGILGVNAGAILMVVIGIAGFGLTDMLHYLWFGLFGAAA 145
           G++L  AG +MQA+TRNPLA PG+ G+NAGA   ++   +   L+ M  +LW    GAA 
Sbjct: 66  GSSLAVAGALMQALTRNPLASPGLFGINAGATFAIIACSSLLTLSSMSQWLWCAFIGAAV 125

Query: 146 TSVGVYLLAGINQ-SPNPVRVVLAGAAMTVVLLSMTHLIMLNSAQEVFNQFRHWSIGSLQ 204
               V+++    Q S NP+R+VLAGAA+T +  + +  +++ + Q+  +    W  GSL 
Sbjct: 126 AGTIVWVIGNRGQGSLNPLRIVLAGAAITALFTAFSQALLVVN-QDGLDTVLFWLAGSLS 184

Query: 205 GRGYEVLLPTSVFVLLGLIAAILLARGLDTVVLGHDAGKALGVNPLWIWIASAAVVTLLA 264
            R      P  V V++GL  A++LA  ++ +  G     ALG     I +  + V+  LA
Sbjct: 185 ERELSTAAPLLVCVVMGLAGALVLAGQVNVLNTGEAIATALGQRTGLIRLMMSVVIIALA 244

Query: 265 GTATAAAGPISFLGLTAPHLARLWVGAEHRRLLPYSMLLGALLLLGADLAGRLIGSNDEI 324
           G+A A AG I F+GL  PH+ R  +  +HR LLP   +LGA LLL AD   R++    E+
Sbjct: 245 GSAVALAGSIGFIGLLVPHMVRKTLSIDHRWLLPGCAVLGATLLLLADTLARVVIVPQEV 304

Query: 325 SAGIMVALIGGPVFVLLVRR 344
             G+M AL G P F+ LVRR
Sbjct: 305 PVGVMTALFGAPFFIALVRR 324