Pairwise Alignments

Query, 350 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

 Score =  163 bits (412), Expect = 7e-45
 Identities = 120/328 (36%), Positives = 170/328 (51%), Gaps = 12/328 (3%)

Query: 25  WLM-GLMLVALMGLTISSVF-VGSRDIPYAVTFDALF-HFDEQNTQHLLVHYLRVPRTGL 81
           WLM G+++ A +GL   S+F + S  I     ++ L     E      +V  LRVPR   
Sbjct: 4   WLMAGVIIAACLGLFWVSLFALSSFSIRQVDAWNGLITQGREGGNIAYIVAQLRVPRALC 63

Query: 82  AILVGAALGAAGVIMQAMTRNPLADPGILGVNAGAILMVVIGIAGF-GLTDMLHYLWFGL 140
           A LVGA LG AG +MQ +TRN LA P + GV AGA L + +   G   L      L    
Sbjct: 64  AALVGACLGVAGALMQGITRNRLASPSLFGVTAGAALGLALFSTGLVALPFPGGALLMTC 123

Query: 141 FGAAATSVGVYLLAGI-NQSPNPVRVVLAGAAMTVVLLSMTHLIML---NSAQEVFNQFR 196
            G A   + V+ L G  + +    R+VLAG A+  +  ++T L ++     AQ V N   
Sbjct: 124 LGGALAWITVFSLGGAWSPATAQGRLVLAGVAVAALCAALTRLTVILVEAQAQSVLN--- 180

Query: 197 HWSIGSLQGRGYEVLLPTSVFVLLGLIAAILLARGLDTVVLGHDAGKALGVNPLWIWIAS 256
            W  GSL   G   L       L+G++ A+  A  L+ + LG DA ++LGV    + +  
Sbjct: 181 -WLAGSLANVGAAQLQLLWPCTLIGVVLAVACAPRLNLINLGEDAARSLGVRIGALRMLV 239

Query: 257 AAVVTLLAGTATAAAGPISFLGLTAPHLARLWVGAEHRRLLPYSMLLGALLLLGADLAGR 316
             V  LL G +  A GPI F+GL AP++AR W+G ++R L+P S  LGA ++L +DL  R
Sbjct: 240 FVVSLLLVGASVCAVGPIGFVGLIAPNIARQWLGNDYRWLIPISAGLGAAIVLASDLISR 299

Query: 317 LIGSNDEISAGIMVALIGGPVFVLLVRR 344
            +    E  AG++ ALIG P F+ L RR
Sbjct: 300 AVAFPVETPAGVVTALIGAPFFLFLARR 327