Pairwise Alignments

Query, 350 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

 Score =  168 bits (425), Expect = 2e-46
 Identities = 125/324 (38%), Positives = 180/324 (55%), Gaps = 23/324 (7%)

Query: 29  LMLVALMGLTISSVFVGSRDIPYAVTFDALFHFDEQNTQHLLVHYLRVPRTGLAILVGAA 88
           L L  L+GL+  +V++     P AV    L H    +++   V   R+PR  +AI+ G A
Sbjct: 15  LALALLLGLSAGTVWL----TPGAV----LDHLIAHDSKDFEVWNHRLPRGLIAIMTGCA 66

Query: 89  LGAAGVIMQAMTRNPLADPGILGVNAGAILMVVIGIAGFGLTDMLHYLWFGLFGAAATSV 148
            G AG I+Q + RNPLA P ILGV  GA L + I I G     +    +    G AA   
Sbjct: 67  FGLAGAIVQGVIRNPLASPEILGVTQGAGLALTIAIIGLPQLPVSALPFVACLGGAA--- 123

Query: 149 GVYLLAGINQSP--NPVRVVLAGAAMTVVLLSMTHLIMLNSAQEVFNQFRHWSIGSLQGR 206
           G  LLA  N     + VR  L+G A+ V L S+T  ++L++  ++ N       GSL  R
Sbjct: 124 GALLLALYNTGVQFSGVRFALSGVAIAVTLSSITEFLILSNPLDI-NTALLALTGSLWSR 182

Query: 207 GYE-VLLPTSVFVLLGLIAAILLARGLDTVVLGHDAGKALGVN---PLWIWIASAAVVTL 262
            +  VLL T + +L+ L  ++LLA+ L+ + LG +A ++LG       W+ + SA ++T 
Sbjct: 183 NWHHVLLATPLLLLIPL--SLLLAKPLNLIGLGDEAAQSLGTGLTRTRWLAMGSAVLLTS 240

Query: 263 LAGTATAAAGPISFLGLTAPHLARLWVGAEHRRLLPYSMLLGALLLLGADLAGRLIGSND 322
           L        GP+SF+GL APH+AR  VG  H+ LLP SM+LGALLL+ AD  GR + +  
Sbjct: 241 LG---VGIIGPVSFVGLVAPHMARRLVGGHHQYLLPASMVLGALLLVLADTLGRTLIAPS 297

Query: 323 EISAGIMVALIGGPVFVLLVRRWK 346
           EI AGI+ A+IG P F+ L+ R+K
Sbjct: 298 EIPAGILTAVIGAPYFLWLLARFK 321