Pairwise Alignments

Query, 350 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., Vitamin B12 transporter, permease component (fecCD-like) (from data) from Shewanella sp. ANA-3

 Score =  130 bits (328), Expect = 4e-35
 Identities = 104/363 (28%), Positives = 168/363 (46%), Gaps = 38/363 (10%)

Query: 22  RDYWL-MGLMLVALMGLTISSVFVGSRDIPYAVTFDA-------LFHFDEQNTQHL---L 70
           R  WL +GL   AL+   I++   G+ +I +             LF  DE  +  +   +
Sbjct: 22  RQQWLILGLAGFALL-TPIAAASFGAANISFLDVLQVFINKLSHLFMADEAVSTSMTERI 80

Query: 71  VHYLRVPRTGLAILVGAALGAAGVIMQAMTRNPLADPGILGVNAGAILMVVIGIAGF--- 127
           V  LR+PR  LA + GA L  AG ++Q +TRNPLADP + G+++GA    V+ +  F   
Sbjct: 81  VMELRLPRIILAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFTGS 140

Query: 128 ----------------GLTDMLHYLWFGL-----FGAAATSVGVYLLAGINQSPNPVRVV 166
                           G       LWF L      GA+ + + V  LAG+       R++
Sbjct: 141 GLFGNAGTIANSGIFSGSGTFAGLLWFSLPFGAFIGASLSVLIVLALAGLGLKSQVERML 200

Query: 167 LAGAAMTVVLLSMTHLIMLNSAQEVFNQFRHWSIGSLQGRGYEVLLPTSVFVLLGLIAAI 226
           L+G A + +  ++T L++  ++ +       WS+GS     + +L+  S+ VLL     +
Sbjct: 201 LSGVATSFMFSALTSLLLYFASPQATASVLFWSLGSFAKASWSLLVLPSLVVLLSFFIIL 260

Query: 227 LLARGLDTVVLGHDAGKALGVNPLWIWIASAAVVTLLAGTATAAAGPISFLGLTAPHLAR 286
              R +  +  G +    LGVN   + +    + +L+     A  G I F+GL  PH  R
Sbjct: 261 GWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPHTVR 320

Query: 287 LWVGAEHRRLLPYSMLLGALLLLGADLAGRLIGSNDEISAGIMVALIGGPVFVLLVRRWK 346
           L        LL  + L+G L ++  D+  R +  N E+  GI+ A IG   F+L++RR K
Sbjct: 321 LLFPGRQPILL--TALVGGLFMVWIDVLARCLLGNQELPVGIITAAIGSFFFLLILRRRK 378

Query: 347 LSH 349
           LS+
Sbjct: 379 LSN 381