Pairwise Alignments

Query, 438 a.a., vibriobactin biosynthesis amide synthase VibH from Vibrio cholerae E7946 ATCC 55056

Subject, 3006 a.a., PROBABLE PEPTIDE SYNTHETASE PROTEIN from Pseudomonas fluorescens FW300-N2E2

 Score = 52.0 bits (123), Expect = 3e-10
 Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 12/150 (8%)

Query: 6    AQKPFWQRHLAYPHINLDTVAHSLRLTGPLDTTLLLRALHLTVSEIDLFRARFSAQGELY 65
            AQ+  W      P      V   L L G LD   L RA  + VS  D  R RF  +    
Sbjct: 1175 AQQRVWFMQQLDPAATAYNVTQLLALRGDLDVPRLQRACQVLVSRHDALRCRFFEEQGQV 1234

Query: 66   WHPFSPPI-------DYQDLSIHLEAEPLAWRQIEQDLQRSSTLIDAPITSHQVYRLSHS 118
            W              D QDL    +AE +A        +R   L   P+ +  V+ ++  
Sbjct: 1235 WQRLDETAAAIFNVHDLQDLDESQQAEAIAGAA-----KRVFDLAQGPLLAIDVFCVAPG 1289

Query: 119  EHLIYTRAHHIVLDGYGMMLFEQRLSQHYQ 148
            ++ +    HHI +DG+ M L  +  +Q YQ
Sbjct: 1290 DYRLLFNVHHIAVDGWSMGLLVEDFAQIYQ 1319



 Score = 47.0 bits (110), Expect = 8e-09
 Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 13/196 (6%)

Query: 6    AQKPFW---QRHLAYPHINLDTVAHSLRLTGPLDTTLLLRALHLTVSEIDLFRARFSAQ- 61
            AQ+  W   Q  LA    N+ +   ++RL G LD   L R++H  V    + R  +  + 
Sbjct: 2215 AQQRVWLMQQLDLADSSFNMSS---NVRLRGQLDRHALERSVHRLVDRHAILRTTYHQRS 2271

Query: 62   GELYWHPFSP-PIDYQDLSIHLEAEPLAWRQIEQDLQRSSTLIDAPITSHQVYRLSHSEH 120
            GELY        +  Q ++ +    P+  R I   L+      +AP+ +  +YRL   EH
Sbjct: 2272 GELYQRIHGQMSVALQVIASNAAQWPVDARDIA--LRPFDLASEAPLRA-VLYRLGEQEH 2328

Query: 121  LIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTP--TAAFKPYQSYLEEEAAYLTSHR 178
            ++    HHI  DG+   +    L Q Y++  +G  P  +     Y  Y   + +     R
Sbjct: 2329 VLQLVMHHIASDGWSGAVLVDELIQGYEAYSTGALPPQSELAIQYVDYAVWQGSAAVQLR 2388

Query: 179  YWQDKQFWQGYLREAP 194
              +   FW+  L   P
Sbjct: 2389 QREGLAFWRQTLAGIP 2404



 Score = 35.0 bits (79), Expect = 3e-05
 Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 13/177 (7%)

Query: 29  LRLTGPLDTTLLLRALHLTVSEIDLFRARFS--AQGELYWHPFS-----PPIDYQDLSIH 81
           LR  G LD   L +A+        + R R++  +QG++  H  S     P ++   L+  
Sbjct: 78  LRFDGRLDGERLQQAMQQLTDRHQILRTRYTTDSQGQMQPHCESQQVPLPSVEPLTLAAS 137

Query: 82  LEAEPLAWRQIEQDLQRSSTLIDAPITSHQVYRLSHSEHL-IYTRAHHIVLDGYGMMLFE 140
            E E     +  + L     L  +     Q +  +  +   ++   HH+  D +      
Sbjct: 138 -EYEQWCADEYARQLAEPFDLAQSVPWRWQAFSDAQEQSTWLFFTIHHVAYDAWSAQQLT 196

Query: 141 QRLSQHYQSLLSGQT---PTAAFKPYQSYLEEEAAYLTSHRYWQDKQFWQGYLREAP 194
             L++ Y++L   +    P  + + Y  Y   E  +L S    Q   FW+G L +AP
Sbjct: 197 LELAEAYRALAMNEPARQPELSIQ-YADYAAWEREWLDSESCRQHIDFWRGQLADAP 252