Pairwise Alignments

Query, 543 a.a., 2,3-dihydroxybenzoate-AMP ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 573 a.a., AMP-binding domain protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  200 bits (508), Expect = 1e-55
 Identities = 161/534 (30%), Positives = 246/534 (46%), Gaps = 33/534 (6%)

Query: 26  TLLDYLQQSAERTPNALALVGDNQ--QWRYQAMLERIEQLAAGFTELGLGCGDNVVLQLG 83
           T+  YL+  A R P+  A+V  +Q  +W Y+  L  I++LA G   LG+G GD V +   
Sbjct: 32  TIGRYLECIANRYPDHEAIVMHHQNIRWSYRQYLTEIDRLATGLLALGIGPGDRVGIWSP 91

Query: 84  NVAEFYLCFFALLRQGIRPILALPAHRLAEIRYFCQHSQAKAYLIDGAQRPFDY----QA 139
           N  E+ L  FA  R G   +   PA+R  E+ Y   +   KA +     +  DY    Q+
Sbjct: 92  NNIEWCLTQFATARIGAIMVCINPAYRPEELEYALVNVGCKALITHDKFKSSDYLAMLQS 151

Query: 140 LAQELLAC---------CPTLQTVIVRGQTRVTDPKFIELASCYSASSCQANADPNQIAF 190
           LA EL  C          P L+ VI  G      P  +      S  S    AD   I+ 
Sbjct: 152 LAPELAHCEAGQLQSSRLPDLKLVIRTGSEAT--PGMLNFDKVCSLGSDAEYADLQGISE 209

Query: 191 ---------FQLSGGTTGTPKLIPRTHNDYAYSVTASVEICRFDQHTRYLCVLPAAHNFP 241
                     Q + GTTG PK    +H++   +     +  RF    R    +P  H F 
Sbjct: 210 KLSPFDPINIQFTSGTTGNPKGATLSHHNILNNGMLVAKGMRFSHLDRLCIPVPLYHCFG 269

Query: 242 LSSPGALGVFWAGGCVVLSQDA-SPQHAFKLIEQHKITVTALVPPLALLWMDHAEKSTYD 300
           +   G L     G   V   DA  P     ++E+   T    VP + +  ++ A  + YD
Sbjct: 270 MVL-GNLVCVATGATAVFPGDAFDPATTLAVVEKEHCTALHGVPTMFIAELELANFNDYD 328

Query: 301 LSSLHFVQVGGAKFSEAAARRLPKALGCQLQQV-FGMAE--GLVNYTRLDDSAELIATTQ 357
           LSSL    + GA   E   +R+   +  Q   + +G  E   + N T +D S EL  TT 
Sbjct: 329 LSSLRTGVMAGATCPEEVMKRVQTLMHMQEVVIGYGQTECSPINNLTEIDSSLELRVTTV 388

Query: 358 GRPISAHDQLLVVDEQGQPVASGEEGYLLTQGPYTIRGYYRADQHNQRAFNAQGFYITGD 417
           GR + AH ++ +VD  G+    GE G + ++G   + GY+  D   +   +++G+  +GD
Sbjct: 389 GRAL-AHTEVKIVDVFGKTQPIGEPGDVCSRGYCVMLGYWNDDAKTRDTIDSEGWLHSGD 447

Query: 418 KVKLSSEGYVIVTGRAKDQINRGGEKIAAEEVENQLLHHPAVHDAALIAISDEYLGERSC 477
              +   GYV + GR KD I RGGE I   E+E +L  HP V DAA+  +  +  GE  C
Sbjct: 448 LGVMDEHGYVRIVGRIKDMIIRGGENIYPREIEEKLFTHPQVQDAAVFGVQSDKYGEEVC 507

Query: 478 AVIVLKPEQSVNTIQLKRFLHQAGLADYKIPDQIQFIDQLPKTSVGKIDKNALR 531
           A I L+P  +++  +++ FL +  +A +K+P  I+F++  P T  GK+ K  +R
Sbjct: 508 AWIKLRPGANLDEQEIRHFLTEK-VAYFKVPRYIKFVESYPMTVTGKLQKFRMR 560