Pairwise Alignments

Query, 543 a.a., 2,3-dihydroxybenzoate-AMP ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  152 bits (384), Expect = 3e-41
 Identities = 147/522 (28%), Positives = 232/522 (44%), Gaps = 36/522 (6%)

Query: 37  RTPNALALVGDNQQWRYQAMLERIEQLAAGFTELGLGCGDNVVLQLGNVAEFYLCFFALL 96
           R P+  A+    ++W Y+ + E+I++  AGF  LG+  G  V L L N   + +C++ +L
Sbjct: 35  RFPDNPAIDFLGRKWTYRELGEQIDRACAGFQSLGVEPGTRVGLCLPNTPYYIICYYGVL 94

Query: 97  RQGIRPILALPAHRLAEIRYFCQHS---------------QAKAYLIDGAQRPFDYQALA 141
           + G   +   P +   E+R   + S               +  A L D A       +++
Sbjct: 95  KAGGIVVNFNPLYVERELRELVEDSGTTLMVTLDLRQIYPKVAALLGDTALERIVVCSMS 154

Query: 142 QELLACCPTLQTVIVRGQTR--VTDPKFIELASCYSASSCQANA--DP-NQIAFFQLSGG 196
             L +    L +V+ R +     TD + I  A   +  +       DP   +A  Q +GG
Sbjct: 155 AILPSVKSLLFSVLKRSELADVPTDRRHIGFAKLIATKTPPRPVAIDPATAVAVLQYTGG 214

Query: 197 TTGTPKLIPRTHNDYAYSVTASVEICRFDQHTRY-----LCVLPAAHNFPLSSPGALGVF 251
           TTG PK    TH +   ++T   +I  +    R+     L VLP  H F ++   A+ V 
Sbjct: 215 TTGLPKGAMLTHANVTGNLT---QILGWFPEARWGEEKMLAVLPFFHVFAMTV--AMNVA 269

Query: 252 WAGGC-VVLSQDASPQHAFKLIEQHKITVTALVPPLALLWMDHAEKSTYDLSSLHFVQVG 310
            A G  ++L      +   K I + K T+   VP +    +    K+ YDLSSL F   G
Sbjct: 270 LALGAELILLPRFDLETVLKTIARKKPTLFPGVPTIYSAIIGAVAKTPYDLSSLRFCLSG 329

Query: 311 GAKFSEAAARRLPKALGCQLQQVFGMAEG--LVNYTRLDDSAELIATTQGRPISAHDQLL 368
           GA        R  +  GC L + +G++E   +V    LD + +  +  Q  P +  +   
Sbjct: 330 GAPLPIEVKTRFEELTGCTLIEGYGLSEASPVVCCNPLDGAIKPGSIGQPLPGTTVEIRS 389

Query: 369 VVDEQGQPVASGEEGYLLTQGPYTIRGYYRADQHNQRAFNAQGFYITGDKVKLSSEGYVI 428
           V+D     V  GE G +  +GP  + GY+R  Q  +  F   G   TGD   +  EGYV 
Sbjct: 390 VLDP-ALIVPRGERGEICVRGPQVMAGYWRRPQDTEDTF-IDGALRTGDIGYIDDEGYVF 447

Query: 429 VTGRAKDQINRGGEKIAAEEVENQLLHHPAVHDAALIAISDEYLGERSCAVIVLKPEQSV 488
           +  R KD I  GG  +    +E  L  H AV +A +I + D+Y GE   A + L+   S 
Sbjct: 448 LVDRIKDVILCGGYNVYPRIIEEALYQHEAVAEAVVIGLPDDYRGEAPKAFVRLRDGHSA 507

Query: 489 NTIQLKRFLHQAGLADYKIPDQIQFIDQLPKTSVGKIDKNAL 530
               LK +L    ++  ++P  I+  D LP+T VGK+ K AL
Sbjct: 508 TPEDLKTYL-ATQISRIEMPKTIELRDDLPRTMVGKLSKKAL 548