Pairwise Alignments

Query, 543 a.a., 2,3-dihydroxybenzoate-AMP ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., AMP-binding protein from Rhodopseudomonas palustris CGA009

 Score =  168 bits (425), Expect = 6e-46
 Identities = 158/549 (28%), Positives = 243/549 (44%), Gaps = 42/549 (7%)

Query: 6   TPWPEA-LAAQYRQLGYWQDKTLLDYLQQSAERTPNALALVG---------DNQQWRYQA 55
           T WPEA +    R+  ++  +++L + ++ A        LV          D++   Y+ 
Sbjct: 2   TFWPEAGIGGALRRETHYDGRSMLCFSERPAHLAAMFDDLVARFGDRPAIVDDRALSYRE 61

Query: 56  MLERIEQLAAGFTELGLGCGDNVVLQLGNVAEFYLCFFALLRQGIRPILALPAHRLAEIR 115
           +   + ++A     LG+G GD V L LGN  EF     A  R G+  +      R AE+ 
Sbjct: 62  LDLLVRKIAVSLAALGIGKGDRVALFLGNCWEFLAVTLACNRLGVLVVPIGIRQRRAELE 121

Query: 116 YFCQHSQAKAYLIDGAQRPFDYQALAQELLACCPTLQTVIVRGQTRVTDPKFIELASCYS 175
           +   +S AK  + + A+   +  A A+      P L    V   T      F +L +   
Sbjct: 122 FLLNNSGAKVVVFE-AELTDEIPAAAE-----VPQLAHRFVAHGTAEGARPFEDLLAAEP 175

Query: 176 ASSCQANADPNQIAFFQLSGGTTGTPKLIPRTHNDYAYSVTASVEICRFDQHTRYLCVLP 235
           A++  A    +  A    + GTTG PK    TH    +S  A        +  R L  +P
Sbjct: 176 ANAPLAEMHEDDTAVILYTSGTTGKPKGAELTHLSILHSSYAFARAHELTERDRGLVAVP 235

Query: 236 AAHNFPLSSPGALGVFWA----GGCVVLSQDASPQHAF-KLIEQHKITVTALVPPLALLW 290
            +H       G +GV +A    GGCVVL + A     F  L  + +IT + LVP +  L 
Sbjct: 236 LSH-----VTGLVGVSYATIAAGGCVVLMRQAFKTVDFLALAARERITYSILVPAIYTLA 290

Query: 291 MDHAEKSTYDLSSLHFVQVGGAKFS----EAAARRLPKALGCQLQQVFGMAEGLVNYTRL 346
           + H E   +DLS+      GGA       E  A+RLP     QL+  +G  E     T +
Sbjct: 291 VMHPEFDKHDLSAWRIGCFGGAPMPVPTIEMLAKRLPNL---QLRNAYGATETTSPTTIM 347

Query: 347 DDSA---ELIATTQGRPISAHDQLLVVDEQGQPVASGEEGYLLTQGPYTIRGYYRADQHN 403
             +     + +  Q  P +    + V+D     VA GE G LL  GP  +  Y++    N
Sbjct: 348 PQAYWRDHMDSVGQAVPYA---HVRVLDADDNEVAPGEPGELLIAGPMVVPRYWQRPDAN 404

Query: 404 QRAFNAQGFYITGDKVKLSSEGYVIVTGRAKDQINRGGEKIAAEEVENQLLHHPAVHDAA 463
            + F   G++ +GD   +  +G+V V  R KD INRGG KI + EVEN +     V + A
Sbjct: 405 AKEF-VNGYWRSGDIGSIDQDGFVRVFDRKKDMINRGGFKIFSAEVENVICGIDGVLETA 463

Query: 464 LIAISDEYLGERSCAVIVLKPEQSVNTIQLKRFLHQAGLADYKIPDQIQF-IDQLPKTSV 522
           +I   D  LGER  A++V     S++   +  +   A ++DYK+P+ I    + LP+ + 
Sbjct: 464 IIGTPDPVLGERVNAIVVTSEGASLSERDVAAYC-AARMSDYKVPESIIIRSEPLPRNAN 522

Query: 523 GKIDKNALR 531
           GKI K  LR
Sbjct: 523 GKIQKTVLR 531