Pairwise Alignments

Query, 543 a.a., 2,3-dihydroxybenzoate-AMP ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., AMP-binding protein from Rhodopseudomonas palustris CGA009

 Score =  149 bits (376), Expect = 3e-40
 Identities = 139/487 (28%), Positives = 211/487 (43%), Gaps = 19/487 (3%)

Query: 48  NQQWRYQAMLERIEQLAAGFTELGLGCGDNVVLQLGNVAEFYLCFFALLRQGIRPILALP 107
           +++W Y A L    +  A +       GD++ +   NV E+ +  +     G+  + A P
Sbjct: 59  SRRWTY-AQLNDDARRCASWLLTQFKTGDHICVWAPNVPEWIVLQYGAALSGLVLVTANP 117

Query: 108 AHRLAEIRYFCQHSQAKAYLIDGAQRPFDYQALAQELLACCPTLQTVIVRGQTRVTDPKF 167
           A + +E+ +  Q SQ+ A     A R  +  A+A+   +    L+ +   G   + + + 
Sbjct: 118 ALKASELEFVLQQSQSVALFHLDAFRGVETGAVARSFASA--KLRCISFSGW--LAEIRR 173

Query: 168 IELASCYSASSCQANADPNQIAFFQLSGGTTGTPKLIPRTHNDYAYSVTASVEICRFDQH 227
            E+ +           DP Q A  Q + GTTG PK     H     + +        D H
Sbjct: 174 TEIGAL-------PRIDPGQPAQIQYTSGTTGRPKGALLHHRGLITNASYVAARAGLD-H 225

Query: 228 TRYLCVLPAAHNFPLSSPGALGVFWAGGCVVLSQDASPQHAFKLIEQHKITVTALVPPLA 287
           +  L  +P  H    S    LG   +   +VL     P      I   +      VP + 
Sbjct: 226 SVLLSPMPLFHTAG-SIMSVLGCLNSRSTLVLPLLFDPGTVLDAIAHTRADTLFGVPTML 284

Query: 288 LLWMDHAEKSTYDLSSLHFVQVGGAKFSEAAARRLPKALGCQLQQVFGMAE--GLVNYTR 345
           L  +D   ++  DLSSL     GGA+      RR+  AL   L  VFG  E   +V+ T 
Sbjct: 285 LAVIDAQLQAPRDLSSLRVAASGGAQVPPELHRRIHDALKLPLLTVFGQTELSPIVSQTC 344

Query: 346 LDDSAELIATTQGRPISAHDQLLVVDEQG-QPVASGEEGYLLTQGPYTIRGYYRADQHNQ 404
           +DD  E    + GRP+  + ++ +VD  G + V  G EG +  +G  T+ GY+ A +   
Sbjct: 345 IDDPDEQRIHSVGRPLW-NVEVRIVDPNGDRVVVIGVEGEIQVRGYQTMLGYFNAPKETS 403

Query: 405 RAFNAQGFYITGDKVKLSSEGYVIVTGRAKDQINRGGEKIAAEEVENQLLHHPAVHDAAL 464
               A G+  TGD   +   GY+ +TGR KD I RGGE I   EVE  LL HPAV D ++
Sbjct: 404 ETITADGWLRTGDLGAMDEAGYLRITGRLKDMIIRGGENIYPAEVEACLLRHPAVADISV 463

Query: 465 IAISDEYLGERSCAVIVLKPEQSVNTIQLKRFLHQAGLADYKIPDQIQFIDQLPKTSVGK 524
               D+  GE   A + L P+  V   +L  F  +  +A +K P         P T+ GK
Sbjct: 464 FGAPDDKWGEVVAAAVRLVPDVPVTATELSAFC-KTEIAPHKAPTVWYACTGFPLTASGK 522

Query: 525 IDKNALR 531
           I K  LR
Sbjct: 523 IQKFRLR 529