Pairwise Alignments

Query, 543 a.a., 2,3-dihydroxybenzoate-AMP ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., putative crotonobetaine/carnitine-CoA ligase (RefSeq) from Shewanella loihica PV-4

 Score =  146 bits (369), Expect = 2e-39
 Identities = 138/531 (25%), Positives = 224/531 (42%), Gaps = 41/531 (7%)

Query: 25  KTLLDYLQQSAERTPNALALV-----GDNQQWRYQAMLERIEQLAAGFTELGLGCGDNVV 79
           +TL    Q+ A++  +  AL+     GD + + YQ++  +I + A  F + G+  GD V 
Sbjct: 7   RTLRCMWQERAQQYSDNTALIYEDAGGDIRTFTYQSLDAQINRAANLFLKQGIAKGDKVA 66

Query: 80  LQLGNVAEFYLCFFALLRQGIRPILALPAHRLAEIRYFCQHSQAKAYLIDGAQRPFDYQA 139
           +QL N  EF  C+F L + G   +     +   E  Y        A + + +  P  Y+A
Sbjct: 67  VQLYNSPEFIFCWFGLAKIGAVIVPINTQYVQGECSYILTKCDVTALVTEPSFLPI-YEA 125

Query: 140 LAQELLACCPTLQTVIVRGQTRVTDPKFIELASCYSASSCQA----------NADPNQIA 189
           LA    A    L+ V V    R    +F    +     + QA          + DP +I 
Sbjct: 126 LA----AKGQRLEQVFV---ARAAGEQFAGRVNFDDQLALQAPTLDLHVPLESEDPAEIL 178

Query: 190 FFQLSGGTTGTPKLIPRTHNDYAYSVTASVEICRFDQHTRYLCVLPAAHNFPLSSPGALG 249
           F   + GTT  PK +  TH +  ++   +    R     RYL ++P  H        A+ 
Sbjct: 179 F---TSGTTSLPKGVVLTHCNLQFAGHYTAWQTRLTAKDRYLSMMPNFH-IDFQCNAAMA 234

Query: 250 VFWAGGCVVLSQDASPQHAFKLIEQHKITVTALVP----PLALLWMDHAEKSTYDLSSLH 305
           VF  G C+V+ +  S +  +K I  ++ T+T  +P     L L  +   E        L 
Sbjct: 235 VFTVGACLVMLEKYSARRFWKQICDYRATLTHSMPMILRTLMLQPVAEGEDQHCLRDMLF 294

Query: 306 FVQVGGAKFSEAAARRLPKALGCQLQQVFGMAEGLVNYTRLDDSAELIATTQGRPISAHD 365
           F+ +   +  +   R         L   +GM E LV              + GRP   ++
Sbjct: 295 FMHISDQEKLDFETR-----FKVTLFNSYGMTETLVGLIGDTPGEPRHWPSIGRPGLGYE 349

Query: 366 QLLVVDEQGQPVASGEEGYLLTQGP---YTIRGYYRADQHNQRAFNAQGFYITGDKVKLS 422
              V+DE G+ V     G L  +G       + YY+  Q  +      G+ ITGDK  + 
Sbjct: 350 AK-VIDETGREVPPNVVGDLWVKGVPGRSLFKEYYQDPQATEAVLRRDGWLITGDKAYVD 408

Query: 423 SEGYVIVTGRAKDQINRGGEKIAAEEVENQLLHHPAVHDAALIAISDEYLGERSCAVIVL 482
             G      R  + I R GE I++ EVEN L+ HPA+ DAA+I ++D    +   A ++ 
Sbjct: 409 ERGLFYFVDRKSNMIKRSGENISSTEVENVLMSHPAIQDAAVIGVADPIRDQAVKAFVIF 468

Query: 483 KPEQSVNTIQLKRFLHQAGLADYKIPDQIQFIDQLPKTSVGKIDKNALRRR 533
            P  S+   ++  F   A +A +K+P  ++  +  P+T   K+DK  L  R
Sbjct: 469 APGMSLTVEEILAFC-SANMAKFKVPSYVEIREAFPRTCTCKVDKKLLETR 518