Pairwise Alignments

Query, 543 a.a., 2,3-dihydroxybenzoate-AMP ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., AMP-binding domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  170 bits (430), Expect = 1e-46
 Identities = 141/538 (26%), Positives = 237/538 (44%), Gaps = 35/538 (6%)

Query: 23  QDKTLLDYLQQSAERTPNALALVGDNQQWR--YQAMLERIEQLAAGFTELGLGCGDNVVL 80
           +++TL   L ++  + P+  A++  ++ +R  Y+   + ++ LA G   LG+  G+ V +
Sbjct: 7   RERTLGQILDETVAKYPDNDAVIYVDRDYRQTYRQFSQVVDDLAKGLMALGVRHGEKVAV 66

Query: 81  QLGNVAEFYLCFFALLRQGIRPILALPAHRLAEIRYFCQHSQAKAYLIDGAQRPFDYQAL 140
              NV  +    FA  + G   +     +R  EIRY    S+ +   I    R  DY   
Sbjct: 67  WATNVPYWVALQFATAKMGAILLTVNTNYREHEIRYLLTQSECENLFIIDGFRDHDY--- 123

Query: 141 AQELLACCPTLQTVIVRGQTRVTD---------------------PKFIELASCYSASSC 179
            Q +    P L+T   RGQ R +                      P+ I +++  S    
Sbjct: 124 VQTIYNMIPELKTQ-PRGQLRCSSLPHLKRVMFLGAEKHRGMYSVPEIISMSAMVSDEEY 182

Query: 180 ---QANADPNQIAFFQLSGGTTGTPKLIPRTHNDYAYSVTASVEICRFDQHTRYLCVLPA 236
              Q   DP+ +   Q + GTTG PK +  TH +   +     +   F +  R    +P 
Sbjct: 183 AERQRALDPHDVVNMQYTSGTTGFPKGVMLTHVNIGNNGYWIGKNQHFTEKDRVCLPVPL 242

Query: 237 AHNFPLSSPGALGVFWAGGCVVLSQDASPQHAFKLIEQHKITVTALVPPLALLWMDHAEK 296
            H F     G L     G  +V+ +  SP H    ++Q K T    VP + L  ++H   
Sbjct: 243 FHCFGCVL-GVLAAINHGAALVILESFSPMHVMASVDQEKCTALYGVPTMFLAVLEHKLF 301

Query: 297 STYDLSSLHFVQVGGAKFSEAAARRLPKALGC-QLQQVFGMAEG--LVNYTRLDDSAELI 353
             +D SSL    + G+   E   RR+ + +   ++   +G+ EG  ++  + + D  E  
Sbjct: 302 ERFDFSSLRTGIMAGSVCPEPLMRRVVEKMYMREITICYGLTEGSPVMTQSLVTDPFERR 361

Query: 354 ATTQGRPISAHDQLLVVDEQGQPVASGEEGYLLTQGPYTIRGYYRADQHNQRAFNAQGFY 413
             T GR +   +  +V  +  + V  G +G ++ +G   ++GYY   +    A +A G+ 
Sbjct: 362 VQTVGRAMPCIEVRIVDPDTNEEVPRGTQGEVVCRGYNVMKGYYNMPEATTAAIDADGWL 421

Query: 414 ITGDKVKLSSEGYVIVTGRAKDQINRGGEKIAAEEVENQLLHHPAVHDAALIAISDEYLG 473
            +GD   +  EGYV++TGR KD I RGGE I   E+E  L     V D  ++ ++    G
Sbjct: 422 HSGDLGVMDEEGYVVITGRIKDMIIRGGENIYPREIEEFLYGMDGVQDVQVVGVNSRKYG 481

Query: 474 ERSCAVIVLKPEQSVNTIQLKRFLHQAGLADYKIPDQIQFIDQLPKTSVGKIDKNALR 531
           E   A I+ KP   +    ++ +  +  +A +K+P  I FID  P T+ GKI K  LR
Sbjct: 482 EEVGAFIIPKPGVEMAPEDVRDYC-RGRIAWHKVPRYISFIDAYPMTASGKIQKFKLR 538