Pairwise Alignments

Query, 543 a.a., 2,3-dihydroxybenzoate-AMP ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 583 a.a., AMP-dependent synthetase and ligase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  149 bits (375), Expect = 4e-40
 Identities = 136/560 (24%), Positives = 237/560 (42%), Gaps = 40/560 (7%)

Query: 2   TTDFTPWPEALAAQYRQLGYWQDKTLLDYLQQSAERTPNALALVGDNQQWRYQAMLERIE 61
           + DF PW  +  A       ++   L   L ++AERTP   A+   N +  Y  + +  E
Sbjct: 7   SADF-PWLASYDAGVPANISYETFPLFTLLDRAAERTPRRTAIAFRNYRISYAKLRQLAE 65

Query: 62  QLAAGFTELGLGCGDNVVLQLGNVAEFYLCFFALLRQGIRPILALPAHRLAEIRYFCQHS 121
            +AA     G+  GD V + L N+ +  + F+A+L+ G   ++  P +   E+ +    S
Sbjct: 66  VMAANLRAQGVRRGDKVSIMLPNLPQTVIAFWAVLKAGGVVVMTNPLYMEKELVHQIHDS 125

Query: 122 QAKAYLI--------------------------DGAQRPFDYQALAQELLACCPTLQTVI 155
            A+  +                           DG   P ++    +       T + + 
Sbjct: 126 GARFMIALDLVWPKIEPLREKLGIDKYFLTRIGDGLAFPLNFLYAFKAKRE--GTWRELP 183

Query: 156 VRGQTRVTDPKFIELASCYSASSCQANADPNQIAFFQLSGGTTGTPKLIPRTHNDYAYSV 215
             G+  +     ++    +S ++C    D   +A  Q +GGTTG  K +  TH++ + +V
Sbjct: 184 FDGRHVLPWKTLLKGKVRHSTTTCNPTED---LAVLQYTGGTTGISKGVMLTHHNMSVNV 240

Query: 216 TASVEIC--RFDQHTRYLCVLPAAHNFPLSSPGALGVFWAGGCVVLSQDASPQHAFKLIE 273
                I     D    +L ++P  H + L++   L    A   V   +   P+     I+
Sbjct: 241 QQITTILGDARDMDHCFLGLMPYFHVYGLTTCLTLPTALAATIVPFPRYV-PRDVLVGIQ 299

Query: 274 QHKITVTALVPPLALLWMDHAEKSTYDLSSLHFVQVGGAKFSEAAARRLPKALGCQLQQV 333
           +HK T+    P + +  M   E   YDL+S+ +   G A       +R  +  G Q+ + 
Sbjct: 300 KHKPTIFPGAPSIYISLMQQKEVGDYDLTSIRYCISGSAPMPVEHIKRFRELTGAQVIEG 359

Query: 334 FGMAEGLVNYTRLDDSAELIATTQ-GRPISAHDQLLVVDEQGQ-PVASGEEGYLLTQGPY 391
           FG+ E     T L+    +  T   G P    +  +V  E GQ P+ +G+ G L+ +GP 
Sbjct: 360 FGLTEASP-VTHLNPIHGVSKTGSIGIPFPDTEARIVDMEVGQVPLPAGKVGELIIRGPQ 418

Query: 392 TIRGYYRADQHNQRAFNAQGFYITGDKVKLSSEGYVIVTGRAKDQINRGGEKIAAEEVEN 451
            ++GY+             G+  TGD   +  +GY  +  R KD    GG  +   E++ 
Sbjct: 419 VMKGYWNRPDETANTLR-NGWLYTGDIAIMDEDGYFTIVDRKKDMFLVGGYNVYPREIDE 477

Query: 452 QLLHHPAVHDAALIAISDEYLGERSCAVIVLKPEQSVNTIQLKRFLHQAGLADYKIPDQI 511
            L  HP + +A  + +     GE   A +V+KP + +   ++     +  LA YK+P Q+
Sbjct: 478 VLHEHPKIKEAVTVGVPHPTRGEMIKAFVVVKPGEKLTKAEVVAHCREK-LASYKVPKQV 536

Query: 512 QFIDQLPKTSVGKIDKNALR 531
           +F D LPKT VGK+ +  LR
Sbjct: 537 EFRDDLPKTVVGKVLRRILR 556