Pairwise Alignments

Query, 543 a.a., 2,3-dihydroxybenzoate-AMP ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  164 bits (416), Expect = 6e-45
 Identities = 134/536 (25%), Positives = 232/536 (43%), Gaps = 45/536 (8%)

Query: 26  TLLDYLQQSAERTPNALALV--GDNQQWRYQAMLERIEQLAAGFTELGLGCGDNVVLQLG 83
           T+ ++ ++ A++ P+   LV    N ++ Y+   ER + LA G  E+G+  GD++ +   
Sbjct: 7   TIGEFFEKQAQKDPDREFLVYPDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWAR 66

Query: 84  NVAEFYLCFFALLRQGIRPILALPAHRLAEIRYFCQHSQAKAYLIDGAQRPFDYQALAQE 143
           NV ++    FA  + G+  +    A++  E+ Y  + S  KA  I  + R  +Y  +  E
Sbjct: 67  NVPDWLTFMFATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYE 126

Query: 144 LLACC-------------PTLQTVIVRGQTR----------------VTDPKFIELASCY 174
           L+                P L+ VI  GQ +                V+D K IE     
Sbjct: 127 LVPELKTSQRGKLNSEEFPYLKNVIYVGQEKHRGMYNTTELMLLGNYVSDEKLIE----- 181

Query: 175 SASSCQANADPNQIAFFQLSGGTTGTPKLIPRTHNDYAYSVTASVEICRFDQHTRYLCVL 234
                +   D + +   Q + GTTG PK +  TH +   +     E  +F +  R    +
Sbjct: 182 ----AKKGLDSDDVINMQYTSGTTGFPKGVMLTHKNILNNGYYIGEKQKFTEEERLCLPV 237

Query: 235 PAAHNFPLSSPGALGVFWAGGCVVLSQDASPQHAFKLIEQHKITVTALVPPLALLWMDHA 294
           P  H F +   G L +   GG +V+ +   P      I++ K T    VP + +    H 
Sbjct: 238 PLFHCFGIVL-GVLALLTHGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHP 296

Query: 295 EKSTYDLSSLHF-VQVGGAKFSEAAARRLPKALGCQLQQVFGMAEG--LVNYTRLDDSAE 351
               +DLSSL   +  G     EA  + +      ++   +G+ E   +   T +DD  E
Sbjct: 297 MFEMFDLSSLRTGIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVFTMTSVDDPFE 356

Query: 352 LIATTQGRPISAHDQLLVVDEQGQPVASGEEGYLLTQGPYTIRGYYRADQHNQRAFNAQG 411
               + G+ +   +  ++  E G+ +A G  G +  +G   ++GYY+  +         G
Sbjct: 357 KRVESVGKAMPHCEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKDG 416

Query: 412 FYITGDKVKLSSEGYVIVTGRAKDQINRGGEKIAAEEVENQLLHHPAVHDAALIAISDEY 471
           +  +GD      +GY  + GR KD I RGGE I   E+E  L   P ++DA ++ I DE 
Sbjct: 417 WLHSGDLAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEK 476

Query: 472 LGERSCAVIVLKPEQSVNTIQLKRFLHQAGLADYKIPDQIQFIDQLPKTSVGKIDK 527
            GE   A ++ K    +    ++ F  +  +A YK+P  +  +++ P T+ GKI K
Sbjct: 477 YGEIVGAFVIPKEGYEIKEEDVRDFALEK-IARYKVPKHVFVVEEFPMTASGKIQK 531