Pairwise Alignments

Query, 543 a.a., 2,3-dihydroxybenzoate-AMP ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., AMP-dependent synthetase and ligase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  189 bits (481), Expect = 2e-52
 Identities = 158/545 (28%), Positives = 251/545 (46%), Gaps = 38/545 (6%)

Query: 26  TLLDYLQQSAERTPNALALVGDNQ--QWRYQAMLERIEQLAAGFTELGLGCGDNVVLQLG 83
           T+ + L Q+A R PN +A + + Q  +W Y+ ++  ++ LA G  +LGL  GD V +   
Sbjct: 36  TIPELLVQTAARFPNHVAAIFEAQGIRWTYRDLIREVDALAGGLLQLGLKPGDRVGVWAP 95

Query: 84  NVAEFYLCFFALLRQGIRPILALPAHRLAEIRYFCQHSQAKAYLIDGAQRPFDYQALAQE 143
           N AE+ L  FA  R GI  +   PA+R  E+ Y  + +   A ++    +  DY A+  E
Sbjct: 96  NCAEWLLAQFATARLGIILVNVNPAYRPFELSYALKKTGCTALILAAQFKNSDYVAMLSE 155

Query: 144 LL-------------ACCPTLQTVIVRGQTR----VTDPKFIELASCYSASSCQA---NA 183
           ++             A  P L+ VIV         +  P  I       A    A     
Sbjct: 156 VVPEIAASDPGALHAAELPDLRAVIVTEAEAPDGMIAFPDLIAKGRAVVAKDLDAITRKL 215

Query: 184 DPNQIAFFQLSGGTTGTPKLIPRTHNDY---AYSVTASVEICRFDQHTRYLCV-LPAAHN 239
           D +     Q + GTTG PK    TH +    A SVT+++++   D     LC+ +P  H 
Sbjct: 216 DCHDPINIQFTSGTTGLPKGATLTHRNIVNNAASVTSAIKLIEQDM----LCIPVPFYHC 271

Query: 240 FPLSSPGALGVFWAGGCVVLSQDA-SPQHAFKLIEQHKITVTALVPPLALLWMDHAEKST 298
           F +   G LG    G  +V+      P      + +H+ T    VP + +  ++H   + 
Sbjct: 272 FGMVM-GTLGCVTKGAAIVVPGPGFDPITTLDTVSKHRCTALYGVPTMFVGMLEHPRFAE 330

Query: 299 YDLSSLHFVQVGGAKFSEAAARRLPKALGC-QLQQVFGMAE-GLVNY-TRLDDSAELIAT 355
           YDLSSL    + GA       R++   +   ++   +GM E   V++ +  DD  +   +
Sbjct: 331 YDLSSLRTGIMAGAPCPIEIMRQVQSRMHMSEVTIAYGMTETSPVSFQSATDDPVQKRVS 390

Query: 356 TQGRPISAHDQLLVVDEQGQPVASGEEGYLLTQGPYTIRGYYRADQHNQRAFNAQGFYIT 415
           + GR I  H ++ +VDE    V  G +G LLT+G   ++GY+        A +A G+  T
Sbjct: 391 SVGR-IQPHVEVKIVDEDSVVVPVGAQGELLTRGYSVMQGYWDEPDKTAEAIDADGWMHT 449

Query: 416 GDKVKLSSEGYVIVTGRAKDQINRGGEKIAAEEVENQLLHHPAVHDAALIAISDEYLGER 475
           GD   L  +G+  +TGR KD I RGGE +   E+E  L  HPA+    +  I D+  GE 
Sbjct: 450 GDLATLDVDGFCKITGRVKDMIVRGGENVYPREIEEFLYTHPAISQVQVFGIPDQKFGEI 509

Query: 476 SCAVIVLKPEQSVNTIQLKRFLHQAGLADYKIPDQIQFIDQLPKTSVGKIDKNALRRRF- 534
             A +V KP       ++  F   + +A +K+P  ++F + LP T  GK  K  +R +  
Sbjct: 510 VVAWLVAKPGADPTEAEILDFCRDS-IAHFKVPAMVRFKNSLPMTVTGKPQKFIMRAQMV 568

Query: 535 DTLGL 539
           + LGL
Sbjct: 569 EELGL 573