Pairwise Alignments

Query, 543 a.a., 2,3-dihydroxybenzoate-AMP ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., long-chain-fatty-acid--CoA ligase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  155 bits (393), Expect = 3e-42
 Identities = 132/551 (23%), Positives = 233/551 (42%), Gaps = 48/551 (8%)

Query: 24  DKTLLDYLQQSAERTPNALALVGDNQQWRY--QAMLERIEQLAAGFTELGLGCGDNVVLQ 81
           ++TL  +L+  AE TP+   +V  ++  R+    + +R++ +A G   +G+  G +V + 
Sbjct: 5   ERTLGQWLEHWAEETPDKEYIVYSDRNLRFTWSQLNQRVDDMAKGLIAVGVERGTHVGIW 64

Query: 82  LGNVAEFYLCFFALLRQGIRPILALPAHRLAEIRYFCQHSQAKAYLIDGAQRPFDY---- 137
             NV ++    +A  + G   +     ++ AE+ Y CQ+S      I   ++  D+    
Sbjct: 65  AANVPDWLTLLYACAKIGAVYVTVNTNYKQAELEYLCQNSDMHTLCIVNGEKDSDFVQMT 124

Query: 138 QALAQELLAC---------CPTLQTVIVRGQTR----------------VTDPKFIELAS 172
             +  EL  C          P ++ VI  GQ +                V D +  EL S
Sbjct: 125 YTMLPELKTCERGHLKSERFPYMKNVIYVGQEKHRGMYNTAEILLLGNNVEDDRLTELKS 184

Query: 173 CYSASSCQANADPNQIAFFQLSGGTTGTPKLIPRTHNDYAYSVTASVEICRFDQHTRYLC 232
                      D + +   Q + GTTG PK +  TH + A +   + E  +F    +  C
Sbjct: 185 ---------KVDCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGFLTGEHMKFTADDKLCC 235

Query: 233 VLPAAHNFPLSSPGALGVFWAGGCVVLSQDASPQHAFKLIEQHKITVTALVPPLALLWMD 292
            +P  H F +     +     G   V+ +   P      I + + T    VP + +  + 
Sbjct: 236 CVPLFHCFGVVL-ATMNCLTHGCTQVMVERFDPLVVLASIHKERCTALYGVPTMFIAELH 294

Query: 293 HAEKSTYDLSSLHFVQVGGAKFSEAAARRLPKALGCQLQQVFGMAEGL--VNYTRLDDSA 350
           H     +D+S L    + G+       +++ + +  ++  V+G+ E    +  TR+DDS 
Sbjct: 295 HPMFDLFDMSCLRTGIMAGSLCPVELMKQVEEKMYMKVTSVYGLTEAAPGMTATRIDDSF 354

Query: 351 ELIATTQGRPISAHDQLLVVDEQGQPVASGEEGYLLTQGPYTIRGYYRADQHNQRAFNAQ 410
           ++   T GR     +  ++  E G+    G +G +  +G  T++GYY+  +      +  
Sbjct: 355 DVRCNTVGRDFEFTEVRVIDPETGEECPVGVQGEMCNRGYNTMKGYYKNPEATAEVIDKD 414

Query: 411 GFYITGDKVKLSSEGYVIVTGRAKDQINRGGEKIAAEEVENQLLHHPAVHDAALIAISDE 470
            F  +GD      +G   +TGR KD I RGGE I   E+E  L     V D  +  I  +
Sbjct: 415 NFLHSGDLGIKDEDGNYRITGRIKDMIIRGGENIYPREIEEFLYKLDGVKDVQVAGIPSK 474

Query: 471 YLGERSCAVIVLKPEQSVNTIQLKRFLHQAGLADYKIPDQIQFIDQLPKTSVGKIDKNAL 530
             GE   A I+L+    ++   ++ F     ++ YKIP  + F+ + P T  GKI K  L
Sbjct: 475 KYGEAVGAFIILQEGVEMHESDVRDFCKNK-ISRYKIPKYVFFVKEFPMTGSGKIQKFRL 533

Query: 531 RRRFDTLGLAL 541
           +     LGL L
Sbjct: 534 K----DLGLQL 540