Pairwise Alignments

Query, 543 a.a., 2,3-dihydroxybenzoate-AMP ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., AMP-binding domain protein (RefSeq) from Shewanella sp. ANA-3

 Score =  186 bits (471), Expect = 3e-51
 Identities = 148/534 (27%), Positives = 246/534 (46%), Gaps = 29/534 (5%)

Query: 24  DKTLLDYLQQSAERTPNALALVGDNQ--QWRYQAMLERIEQLAAGFTELGLGCGDNVVLQ 81
           +KT+  YL   A   P  LA+V ++Q  +W Y+  L +I+ LA G  +LG+G GD V + 
Sbjct: 31  EKTIGQYLNDIANVYPEQLAVVVNHQDIRWNYRQYLAQIDALATGLLKLGIGPGDRVGIW 90

Query: 82  LGNVAEFYLCFFALLRQGIRPILALPAHRLAEIRYFCQHSQAKAYLIDGAQRPFDY---- 137
             N  E+ L  FA  + G   +   PA+R  E++Y   +   +A +     +  +Y    
Sbjct: 91  SPNNIEWCLTQFATAKIGAIMVCINPAYRPEELQYALTNVGCRAVICADKFKSSNYLQML 150

Query: 138 QALAQELLACC---------PTLQTVIVRGQTRVT-----DPKFIELASCYSAS--SCQA 181
             LA EL  C          P LQ VI  G  +       D   +E+ +   A+      
Sbjct: 151 YELAPELKVCAAGQLQAKALPDLQFVIRMGAEQSPGMLNFDDLLVEVTADDKAALERIAE 210

Query: 182 NADPNQIAFFQLSGGTTGTPKLIPRTHNDYAYSVTASVEICRFDQHTRYLCVLPAAHNFP 241
           +  P      Q + GTTG+PK    +H++   +     E  +F    +    +P  H F 
Sbjct: 211 SLSPYDAINIQFTSGTTGSPKGATLSHHNILNNGYLVAEAMKFTCEDKLCIPVPLYHCFG 270

Query: 242 LSSPGALGVFWAGGCVVLSQDA-SPQHAFKLIEQHKITVTALVPPLALLWMDHAEKSTYD 300
           +   G L     G   V   D+  P    +++E+ + T    VP + +  ++H E   +D
Sbjct: 271 MVL-GNLVCLAKGAAAVFPGDSFDPLTTLEVVERERCTALHGVPTMFIAELEHPEFKRFD 329

Query: 301 LSSLHFVQVGGAKFSEAAARRLPKALGCQLQQV-FGMAE--GLVNYTRLDDSAELIATTQ 357
           LSSL    + GA   E   RR+   +  Q   + +G  E   L + T +D   E    T 
Sbjct: 330 LSSLRTGVMAGATCPEEVMRRVQNLMYMQEVLIGYGQTECSPLNHITEIDSPVEKRVLTV 389

Query: 358 GRPISAHDQLLVVDEQGQPVASGEEGYLLTQGPYTIRGYYRADQHNQRAFNAQGFYITGD 417
           GR +  H ++ +VDE G+ +     G + ++G   ++ Y+   +      +++G+  +GD
Sbjct: 390 GRALP-HTEVKIVDEFGEVLPINTPGEVCSRGYCIMQCYWNDPEKTAATIDSEGWLHSGD 448

Query: 418 KVKLSSEGYVIVTGRAKDQINRGGEKIAAEEVENQLLHHPAVHDAALIAISDEYLGERSC 477
             ++  +GYV + GR KD I RGGE I   E+E +L  H  V DAA+  +  +  GE  C
Sbjct: 449 IGQMDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVHSDKYGEEVC 508

Query: 478 AVIVLKPEQSVNTIQLKRFLHQAGLADYKIPDQIQFIDQLPKTSVGKIDKNALR 531
           A I ++   +++   ++ FL +   A +K+P  I+F++Q P T  GKI K  +R
Sbjct: 509 AWIKIRSGATISEEDIRHFLTEK-FAYFKVPRYIKFVEQYPMTVTGKIQKFKMR 561