Pairwise Alignments

Query, 446 a.a., exodeoxyribonuclease VII large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 537 a.a., Exodeoxyribonuclease VII (NCBI) from Rhodospirillum rubrum S1H

 Score =  231 bits (589), Expect = 4e-65
 Identities = 160/479 (33%), Positives = 237/479 (49%), Gaps = 48/479 (10%)

Query: 12  TVSRLNSEVRLLLENEMGIVWLVGEISNFSAPVSGHWYLTLKDSQAQVKCAMFKGNNRLV 71
           +VS L+  ++  +E     V + GEIS      SGH YL LKD QA +   +++G    +
Sbjct: 16  SVSELSGALKRTIEEAFSRVRVRGEISQPKVAGSGHCYLRLKDDQAVIDAIIWRGTMAKL 75

Query: 72  NFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAEGLFAQT 131
             +P+ G +V+   RL+ Y  R  YQI++ES++  G+G L +  E+ + +LAAEGLF   
Sbjct: 76  ALRPEEGLEVIAIGRLTTYPGRSSYQIVIESLELAGEGALLKMLEERRRRLAAEGLFDAG 135

Query: 132 RKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQIAQAIG 191
           RK+  P  P  +G+ITS TGA + DILH L  R P  PV+++P  VQGE AA QIA AI 
Sbjct: 136 RKRRPPFLPSVIGVITSPTGAVIRDILHRLADRFPR-PVLVWPVAVQGEGAAAQIAAAIT 194

Query: 192 RANTR------AECDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGHEIDVTI 245
             N           DVLIV RGGGSLEDL  FN E V R  +AS IP+ISAVGHE D T+
Sbjct: 195 GFNALPAGGPVPRPDVLIVARGGGSLEDLMAFNDEAVVRAASASAIPLISAVGHETDTTL 254

Query: 246 ADFVADVRAPTPSAAAEL-------------------------VSRDHRHKQQALHQWQA 280
            D  AD+RAPTP+ AAE+                         +  + R + + L +   
Sbjct: 255 IDHAADLRAPTPTGAAEMAVPVRLDLLAQVRERGGRLDGATLRLIEERRLRIEGLGRGLP 314

Query: 281 KLASTMRHYLAQQETQFARLQHKLDKQ---------HPQARLE-------RQQQQLDELS 324
            LA  +  +  + + +  RL+  L +          H  ARL        R+   L+   
Sbjct: 315 DLARLIGTFAQRLDDRAERLEAALPRLLDRRADGVFHTAARLRGPGEMIARKADALERAG 374

Query: 325 LRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIRQQRFNLIQQEQRINQSIQRYLIQSR 384
             LE  + + L     R D+ + ++       L+ +    L     R++   ++ L++ +
Sbjct: 375 RGLETGLARGLREAASRLDQRADRLRPGQIARLVAEGSRALTTLAGRLDDLGRQTLVRRQ 434

Query: 385 HQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPGDTLVTQLMDGEILSTV 443
             L  L  +LD +S    L RGY+V R   G +V  +  +  GD +V    DG + +T+
Sbjct: 435 DTLEGLGARLDNMSYRKVLERGYAVVRDATGAIVPAARGLTKGDGVVLDFRDGRVAATI 493