Pairwise Alignments

Query, 446 a.a., exodeoxyribonuclease VII large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., exodeoxyribonuclease VII large subunit (RefSeq) from Shewanella loihica PV-4

 Score =  469 bits (1208), Expect = e-137
 Identities = 233/439 (53%), Positives = 312/439 (71%)

Query: 5   LANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSAPVSGHWYLTLKDSQAQVKCAMF 64
           +   N+YTVSRLN EVR LLE E+G VWL  EISNFSAP SGHWYLTLKD+ AQ++ AMF
Sbjct: 3   MPKNNVYTVSRLNGEVRQLLEGELGKVWLEAEISNFSAPSSGHWYLTLKDNYAQIRAAMF 62

Query: 65  KGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAA 124
           KG NR V F+P NGQQVLVK  +S+YEPRGDYQ+I++SM P GDG L QQ+E LKM+LAA
Sbjct: 63  KGRNRAVTFRPANGQQVLVKGAISVYEPRGDYQLIIDSMLPAGDGLLAQQYEALKMKLAA 122

Query: 125 EGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAI 184
           EGLFA   K+PLP N + +G++TS TGAA+ D+LHVLKRRDP++ V+IYP+ VQGE A  
Sbjct: 123 EGLFAADTKRPLPSNIQRIGVVTSATGAAIRDVLHVLKRRDPSIEVIIYPSQVQGEHADK 182

Query: 185 QIAQAIGRANTRAECDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGHEIDVT 244
            +  AI +AN R E DVL++ RGGGSLEDLWCFN E +A TI  S +P++SAVGHE+D T
Sbjct: 183 SLCHAIMQANDRMEVDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHEVDTT 242

Query: 245 IADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQETQFARLQHKL 304
           I+D+VAD+RAPTPSAAAEL+S+D   K   L     +L    +HY  +Q  +F++L H+L
Sbjct: 243 ISDYVADLRAPTPSAAAELLSQDALSKADKLRMTMTRLKQGWQHYGLKQAQRFSQLHHRL 302

Query: 305 DKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIRQQRFN 364
           ++Q P+ RL++ +Q+ DEL LRL   +  +L   ++R   L  ++   SP H +      
Sbjct: 303 ERQDPKRRLQQYEQRFDELQLRLGAALTGKLHQMERRQQSLHARLNQVSPSHQLALAASR 362

Query: 365 LIQQEQRINQSIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQV 424
           L  Q QR++ ++Q  L  +   L   + +L+ VSPLATL+RGYS+T  T+G+++  +  V
Sbjct: 363 LTHQNQRLHSAMQARLNSAEKSLQYAAHQLETVSPLATLSRGYSITLDTEGKVLHSAQDV 422

Query: 425 KPGDTLVTQLMDGEILSTV 443
           + G  L T+L+DGE+ STV
Sbjct: 423 RTGARLTTKLVDGEVQSTV 441