Pairwise Alignments

Query, 446 a.a., exodeoxyribonuclease VII large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., exodeoxyribonuclease VII large subunit from Methanococcus maripaludis JJ

 Score =  258 bits (659), Expect = 2e-73
 Identities = 130/363 (35%), Positives = 226/363 (62%), Gaps = 3/363 (0%)

Query: 9   NIYTVSRLNSEVRLLLENEMGI--VWLVGEISNFSAPVSGHWYLTLKDSQAQVKCAMFKG 66
           N  TVS LNS V+  LE +  +    + GEISN +   SGH Y TLKD  + + C MFK 
Sbjct: 12  NTLTVSELNSYVKSTLEEDFLLKRACIKGEISNCTLHKSGHVYFTLKDENSAIDCVMFKP 71

Query: 67  NNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAEG 126
             + ++F P  G  V++K ++SLY   G YQ     M+ EG G L  +F++LK +L +EG
Sbjct: 72  YTKKLDFSPTEGMSVIIKGKVSLYTKTGKYQFYCNEMEKEGLGDLFIKFKKLKEKLESEG 131

Query: 127 LFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQI 186
           LF +  K+ +P+  + +GIITS TGAA+ DI+ V + R+ ++ ++IYP +VQGE AA  +
Sbjct: 132 LFNEEYKQKIPKYLKNIGIITSPTGAAIRDIIKVTRNRNSSVNIIIYPAVVQGESAAKTV 191

Query: 187 AQAIGRANTRAECDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGHEIDVTIA 246
              I   N   + D++I+ RGGGS+EDLWCFN+E + RTI  S+ P+I+ +GHE D TI+
Sbjct: 192 IAGISELNKLEKIDLIIIARGGGSMEDLWCFNNESLVRTIFESKKPVITGIGHETDFTIS 251

Query: 247 DFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQETQFARLQHKLDK 306
           DFV+D+RA TPS AAEL   +    +  ++  +  L   ++  ++ +  +   L  K++K
Sbjct: 252 DFVSDLRAATPSNAAELAIYNEYELKSMINNLERMLKHKVKTEISNRSYELDILYSKIEK 311

Query: 307 QHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIRQQRFNLI 366
             P++++E+Q+  +D++  ++  +++ +++ + +R+++    +  ++P++++  + +++I
Sbjct: 312 NSPKSKIEKQKVHVDKIRAQMNHEIKNKISYEVKRFEKSYSLLNAYNPLNVL-NKGYSII 370

Query: 367 QQE 369
           Q E
Sbjct: 371 QDE 373