Pairwise Alignments

Query, 446 a.a., exodeoxyribonuclease VII large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., exodeoxyribonuclease VII, large subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  462 bits (1189), Expect = e-135
 Identities = 231/435 (53%), Positives = 311/435 (71%)

Query: 9   NIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSAPVSGHWYLTLKDSQAQVKCAMFKGNN 68
           NIYTVSRLN EVR +LE ++G +WL GEISNFS P SGHWYLTLKD  +Q++CAMFKG N
Sbjct: 7   NIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSTPSSGHWYLTLKDHFSQIRCAMFKGRN 66

Query: 69  RLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAEGLF 128
           + V+FKP NGQQV+VK  +S+YEPRGDYQ+++ESM P GDG L QQFE LKM+LAA GLF
Sbjct: 67  QSVSFKPVNGQQVIVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFEALKMKLAALGLF 126

Query: 129 AQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQIAQ 188
           A   K+ LP+N + +G+ITS TGAA+ D+LHVL RRDP++ V+IYPT VQGE A I I Q
Sbjct: 127 AADTKRALPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGENADINICQ 186

Query: 189 AIGRANTRAECDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGHEIDVTIADF 248
           AI  AN R E DVL++ RGGGSLEDLWCFN E +A TI  S +PI+SAVGHE+D TI+D+
Sbjct: 187 AINIANQRLEVDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPIVSAVGHEVDTTISDY 246

Query: 249 VADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQETQFARLQHKLDKQH 308
           VADVRAPTPSA AEL+S+D  +K Q L    A+L  +  HY  +QE + + L+H+L +  
Sbjct: 247 VADVRAPTPSAGAELLSQDSDNKSQRLATVLARLKQSASHYQLKQERRLSLLEHRLQRLD 306

Query: 309 PQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIRQQRFNLIQQ 368
           P+  L++ +Q+ DE+ LRLE  +  +L    +R  +L+ ++E  SP H +  +   L   
Sbjct: 307 PKRTLQQFEQRFDEMQLRLEAALTNKLHGLSRRQQQLASRLEQQSPKHKLALEANRLSYL 366

Query: 369 EQRINQSIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPGD 428
             R+  ++Q  L  S  ++  ++ +L+ VSPLATL+RGYS+T    G ++  ++Q+  GD
Sbjct: 367 ATRLQDAMQDKLSHSGQRIKYVAHQLETVSPLATLSRGYSITTDVNGAVITSASQISLGD 426

Query: 429 TLVTQLMDGEILSTV 443
           T+ TQL +  ++STV
Sbjct: 427 TITTQLSNERLMSTV 441