Pairwise Alignments

Query, 446 a.a., exodeoxyribonuclease VII large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., exodeoxyribonuclease VII large subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  464 bits (1194), Expect = e-135
 Identities = 231/435 (53%), Positives = 313/435 (71%)

Query: 9   NIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSAPVSGHWYLTLKDSQAQVKCAMFKGNN 68
           NIYTVSRLN EVR +LE ++G VWL GEISNFSAP SGHWYLTLKD  +Q++CAMFKG N
Sbjct: 7   NIYTVSRLNGEVRQILEGQLGKVWLNGEISNFSAPSSGHWYLTLKDHYSQIRCAMFKGRN 66

Query: 69  RLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAEGLF 128
           + V+FKP NGQQVLVK  +S+YEPRGDYQ+++ESM P GDG L QQFE LKM+LAA+GLF
Sbjct: 67  QSVSFKPVNGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFEALKMKLAAQGLF 126

Query: 129 AQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQIAQ 188
           A   K+ LP+N + +G+ITS TGAA+ D+LHVL RRDP++ V+IYPT VQGE A + I Q
Sbjct: 127 AADTKRQLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGENADMNICQ 186

Query: 189 AIGRANTRAECDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGHEIDVTIADF 248
           AI  AN R E DVL++ RGGGSLEDLWCFN E +A TI  S +P++SAVGHE+D TI+D+
Sbjct: 187 AINIANQRLEVDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHEVDTTISDY 246

Query: 249 VADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQETQFARLQHKLDKQH 308
           VADVRAPTPSA AEL+S+D  +K Q L    ++L  +  HY  +QE + + L+H+L +  
Sbjct: 247 VADVRAPTPSAGAELLSQDSDNKSQRLATVLSRLKQSASHYQLKQEKRLSLLEHRLQRLD 306

Query: 309 PQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIRQQRFNLIQQ 368
           P+  L++ +Q+ DE+ LRLE  +  +L    +R  +L++++E  SP H +  +   L   
Sbjct: 307 PKRTLQQFEQRFDEMQLRLEAALSNKLHGLSRRQQQLANRLEQQSPKHKLALETNRLSYL 366

Query: 369 EQRINQSIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPGD 428
             R+  ++Q  L QS  ++   + +L+ VSPLATL+RGYS+T     +++  +AQ+  GD
Sbjct: 367 ATRLQDAMQDTLNQSEQRITYAAHQLETVSPLATLSRGYSITTDANNQVIDNAAQLSVGD 426

Query: 429 TLVTQLMDGEILSTV 443
            + T+L  G++ STV
Sbjct: 427 KINTRLRHGQVQSTV 441