Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., tRNA modification GTPase TrmE from Pseudomonas stutzeri RCH2

 Score = 68.9 bits (167), Expect = 3e-16
 Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 14/149 (9%)

Query: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRK 267
           + I GRPN GKS+L N + G E  +V D+ GTTRD +   +  D     ++DTAG+R  +
Sbjct: 219 VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHILIDGMPLHVVDTAGLRDTE 278

Query: 268 RINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSL----LGFALNSGRSIVIAV 323
              + VE+  V + L AI +A+ +LL+VDA    ++  L+L    L F+    R + +  
Sbjct: 279 ---DQVERIGVQRALSAIGEADRILLMVDASAPEAEDPLALWPEFLDFSPEPSR-VTLIR 334

Query: 324 NKWD------GLSFDVKEHVKKELDRRLG 346
           NK D       LS     HV   L  R G
Sbjct: 335 NKADLSGEAIALSVSADGHVTLSLCARSG 363



 Score = 65.5 bits (158), Expect = 4e-15
 Identities = 37/89 (41%), Positives = 49/89 (55%)

Query: 5   VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGIDGSE 64
           V + GRPN GKS+L N L     A+V D  G TRD       +      V+DT G+  +E
Sbjct: 219 VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHILIDGMPLHVVDTAGLRDTE 278

Query: 65  EGVETKMAQQSLAAIDEADVVLFMVDGRA 93
           + VE    Q++L+AI EAD +L MVD  A
Sbjct: 279 DQVERIGVQRALSAIGEADRILLMVDASA 307