Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., GTP-binding protein EngA from Synechococcus elongatus PCC 7942

 Score =  298 bits (762), Expect = 3e-85
 Identities = 181/470 (38%), Positives = 269/470 (57%), Gaps = 38/470 (8%)

Query: 2   VPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI- 60
           +P+VA++GRPNVGKSTL NRL  +R+A+V D PG+TRDR Y +A   + +F V+DTGG+ 
Sbjct: 3   LPIVAILGRPNVGKSTLVNRLAGSREAIVHDEPGVTRDRTYQEAFWCDRDFTVVDTGGLV 62

Query: 61  -DGSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNK 119
            D   E +   + +Q+  A+ EA + + +VDG+AGLT AD  IA  LR   +P ++ VNK
Sbjct: 63  FDDDTEFLPL-IREQAELALAEAALAVLVVDGQAGLTAADNEIADWLRHQNRPIVVAVNK 121

Query: 120 VDGIDADAA-SAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQMESEQAQLEDLTN 178
            +  D  AA +AEFW LG  +   I++ HG G G L+DRVL                   
Sbjct: 122 CESPDKGAAQAAEFWSLGFGEPLPISSIHGSGTGELLDRVL------------------- 162

Query: 179 EEDPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPG 238
                 E L  ++E A  E +      I +AI+GRPNVGKS+L N  LGE+R +V  + G
Sbjct: 163 ------ELLPPADEAAGDETE------IGVAIVGRPNVGKSSLLNSFLGEQRAIVSPIAG 210

Query: 239 TTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDAR 298
           TTRD+I   ++R+++ Y L+DTAG+RR++ ++   E F + ++ +AI  A+V LLV+D  
Sbjct: 211 TTRDAIDTVIERNDQRYRLVDTAGIRRKRGVDYGPEFFGINRSFKAIRRADVCLLVIDVL 270

Query: 299 ENISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKE--HVKKELDRRLGFVDFARIHFI 356
           + ++DQD  L G     GR+ VI VNKWD    D      V+++L  RL F+D+A + F+
Sbjct: 271 DGVTDQDQKLAGRIEEDGRACVIVVNKWDAHEKDSSTIYEVERQLRDRLYFLDWAPMIFV 330

Query: 357 SALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVR-GRRVKLKYAHA 415
           SAL G  V  + + V         RVGTSV+  ++  A     PP  R GR+ ++ Y   
Sbjct: 331 SALTGQRVEKILDQVNTVVEQHRRRVGTSVINEVLGDAIAWRTPPTTRQGRQGRIYYGTQ 390

Query: 416 GGYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRIQFQNSEN 465
               PP   +  N      +SY+RY+   +R+SL   GTPIR+ ++  ++
Sbjct: 391 VTTQPPSFTLFVNDPKLFGESYRRYIERQFRESLGFSGTPIRLFWRGKKS 440