Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., GTP-binding protein Era from Synechococcus elongatus PCC 7942

 Score = 90.1 bits (222), Expect = 1e-22
 Identities = 57/160 (35%), Positives = 88/160 (55%), Gaps = 6/160 (3%)

Query: 5   VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGIDGSE 64
           VAL+GRPNVGKSTL N L   + A+ +     TR+R  G     + + + +DT GI   +
Sbjct: 20  VALIGRPNVGKSTLMNHLVGQKIAITSPVAQTTRNRLRGVLTTDQVQIVFVDTPGIHKPQ 79

Query: 65  EGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKVD--- 121
             + + + Q + +AI   D+VLF+VDG       D  IA  ++R   P +L +NKVD   
Sbjct: 80  HQLGSVLVQNASSAIRIVDLVLFVVDGSVPAGRGDAFIADLIQRAGVPTVLGLNKVDRQL 139

Query: 122 GIDADAASAEFWQLGMDQ---MYQIAAAHGRGVGALIDRV 158
             DA+A +A + QL  D+   +   +A  G G GAL++++
Sbjct: 140 PEDAEAIAASYAQLAGDRDWPLQTFSATTGAGTGALLEQL 179



 Score = 64.3 bits (155), Expect = 6e-15
 Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 208 LAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRK 267
           +A+IGRPNVGKSTL N ++G++  +   +  TTR+ +   +  D+ + V +DT G+ + +
Sbjct: 20  VALIGRPNVGKSTLMNHLVGQKIAITSPVAQTTRNRLRGVLTTDQVQIVFVDTPGIHKPQ 79

Query: 268 RINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVNKWD 327
                +    V     AI   ++VL VVD        D  +      +G   V+ +NK D
Sbjct: 80  ---HQLGSVLVQNASSAIRIVDLVLFVVDGSVPAGRGDAFIADLIQRAGVPTVLGLNKVD 136

Query: 328 GLSFDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEA 374
               +  E +     +  G  D+  +   SA  G G G L E +  A
Sbjct: 137 RQLPEDAEAIAASYAQLAGDRDWP-LQTFSATTGAGTGALLEQLTHA 182