Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., GTP-binding protein EngA (RefSeq) from Shewanella amazonensis SB2B

 Score =  730 bits (1884), Expect = 0.0
 Identities = 358/495 (72%), Positives = 426/495 (86%), Gaps = 10/495 (2%)

Query: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
           M+PVVALVGRPNVGKSTLFNRLTRTRDALVAD+PGLTRDRKYG+A L  +EFIV+DTGGI
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGI 60

Query: 61  DGSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKV 120
           DG+EEG+ETKMA+QSLAAI+EADVVLFM D RAGLT AD AIAQHLR  +K   +V NKV
Sbjct: 61  DGTEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLAIAQHLRSRDKITFVVANKV 120

Query: 121 DGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQMESEQAQLEDLTNEE 180
           DGIDAD+A  EFWQLG+ ++YQ+AAA GRGV  L++  L PFAE M         L  ++
Sbjct: 121 DGIDADSACGEFWQLGLGEVYQMAAAQGRGVTGLVEYALAPFAEAM--------GLVRDD 172

Query: 181 DPE--EEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPG 238
           D E   ++  Y+EEEAEAE +RL + PIKLAIIG+PNVGKSTLTNRILGEERVVVYD PG
Sbjct: 173 DGEVVTDERNYTEEEAEAEQQRLAEQPIKLAIIGKPNVGKSTLTNRILGEERVVVYDQPG 232

Query: 239 TTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDAR 298
           TTRDS+YIPM+RD R YVLIDTAGVRRR R++E +EKFSV+KTL+A+ED+NVVLLV+DA 
Sbjct: 233 TTRDSVYIPMERDGRNYVLIDTAGVRRRARVHEVIEKFSVIKTLKAVEDSNVVLLVIDAH 292

Query: 299 ENISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISA 358
           E I++QDL LLGF LNSGR++V+AVNKWDGL  DVK+ VK ELDRRLGF+DFARIHFISA
Sbjct: 293 EGIAEQDLGLLGFVLNSGRALVLAVNKWDGLDQDVKDRVKTELDRRLGFIDFARIHFISA 352

Query: 359 LHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGGY 418
           LHGTGVGHLFES++EAY SAT RV TS+LTRIM+MA DDHQPPMV GRRVKLKYAH GGY
Sbjct: 353 LHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMAQDDHQPPMVNGRRVKLKYAHVGGY 412

Query: 419 NPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRIQFQNSENPFEGKTNKMTLSQ 478
           NPPI+V+HGNQV+ LPDSYKRY+MNYYR++L+++GTPI+++F   +NPFEG+  K+TLSQ
Sbjct: 413 NPPIVVVHGNQVSRLPDSYKRYMMNYYRRALKVVGTPIQLRFHEGDNPFEGRKEKLTLSQ 472

Query: 479 ERQRKRLMSMVKNRR 493
           ER+RKR+MS +K+++
Sbjct: 473 ERRRKRMMSHIKSKK 487