Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., GTP-binding protein EngA (RefSeq) from Shewanella loihica PV-4

 Score =  744 bits (1922), Expect = 0.0
 Identities = 370/497 (74%), Positives = 436/497 (87%), Gaps = 11/497 (2%)

Query: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
           M+PVVALVGRPNVGKSTLFNRLTRTRDALVAD+PGLTRDRKYG+A L  +EFIV+DTGGI
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGI 60

Query: 61  DGSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKV 120
           DG+EEG+ET+MA+QSLAAI+EADVVLF+ D RAGLT ADEAIA+HLRR EK   +V NKV
Sbjct: 61  DGTEEGIETRMAEQSLAAIEEADVVLFLTDARAGLTAADEAIAEHLRRREKTTFVVANKV 120

Query: 121 DGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQMESEQAQLEDLTNEE 180
           DGIDAD+A  EFW LG+ ++YQ+AAA GRGV  +I+  L P+AE M         LT + 
Sbjct: 121 DGIDADSACGEFWALGLGEVYQMAAAQGRGVTNMIEYALTPYAEAM--------GLTRDG 172

Query: 181 DPEEE--QLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPG 238
           + EEE  + +Y+EEEAEAE +RLQDLPIKLAIIG+PNVGKSTLTNRILGEERVVVYD PG
Sbjct: 173 EGEEEADERQYTEEEAEAEQQRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPG 232

Query: 239 TTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDAR 298
           TTRDSIYIP++RD +EYV+IDTAGVRRR +++ETVEKFSV+KTL+A+EDANVVLLVVDAR
Sbjct: 233 TTRDSIYIPLERDGQEYVIIDTAGVRRRSKVHETVEKFSVIKTLKAVEDANVVLLVVDAR 292

Query: 299 ENISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISA 358
           E I++QDL LLGFALN GR++VIAVNKWDG+  DVKE VK ELDRRLGF+DFARIHFISA
Sbjct: 293 EGIAEQDLGLLGFALNVGRALVIAVNKWDGIDQDVKERVKSELDRRLGFIDFARIHFISA 352

Query: 359 LHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGGY 418
           LHGTGVGHLFESV+EAY SAT RV TS+LTRIM+MA DDHQPP+V GRRVKLKYAHAGGY
Sbjct: 353 LHGTGVGHLFESVEEAYESATRRVSTSMLTRIMQMAQDDHQPPLVNGRRVKLKYAHAGGY 412

Query: 419 NPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRIQFQNSENPFEG-KTNKMTLS 477
           NPPI+VIHGNQV +LPDSYKR++MNYYR+SL++MGTPI+++FQ   NPFEG  T K+T+S
Sbjct: 413 NPPIVVIHGNQVKKLPDSYKRFMMNYYRRSLKVMGTPIQVRFQEGGNPFEGLNTKKLTVS 472

Query: 478 QERQRKRLMSMVKNRRK 494
           QER+RKR+MS +K+++K
Sbjct: 473 QERRRKRMMSHIKDKKK 489