Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., tRNA modification GTPase TrmE from Dechlorosoma suillum PS

 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 5/122 (4%)

Query: 5   VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGIDGSE 64
           V L G+PNVGKS+L N L     A+V    G TRD   G  ++      VIDT G+  +E
Sbjct: 219 VVLAGQPNVGKSSLLNGLAGDELAIVTPIAGTTRDVVRGNLQIEGIPLHVIDTAGLRETE 278

Query: 65  EGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRI--EKPAILVVNKVDG 122
           + VE    +++   I++ADV++ + D R G+   +EAI   LRR+  + P I V NK+D 
Sbjct: 279 DEVERLGIERTWREIEKADVLVLLADAREGIAHGEEAI---LRRLPPDLPRITVYNKIDL 335

Query: 123 ID 124
            D
Sbjct: 336 TD 337



 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 40/114 (35%), Positives = 69/114 (60%), Gaps = 3/114 (2%)

Query: 196 AEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREY 255
           A   RL    + + + G+PNVGKS+L N + G+E  +V  + GTTRD +   ++ +    
Sbjct: 207 ARQGRLLQNGLHVVLAGQPNVGKSSLLNGLAGDELAIVTPIAGTTRDVVRGNLQIEGIPL 266

Query: 256 VLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDARENISDQDLSLL 309
            +IDTAG+R  +   + VE+  + +T + IE A+V++L+ DARE I+  + ++L
Sbjct: 267 HVIDTAGLRETE---DEVERLGIERTWREIEKADVLVLLADAREGIAHGEEAIL 317