Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., GTP-binding protein EngA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  293 bits (750), Expect = 1e-83
 Identities = 180/485 (37%), Positives = 263/485 (54%), Gaps = 24/485 (4%)

Query: 2   VPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKL-GEHEFIVIDTGGI 60
           +P +ALVGRPNVGKSTLFNRL R   A+  D PG+TRDR  GQ +  G+  F ++DTGGI
Sbjct: 17  LPKIALVGRPNVGKSTLFNRLIRANRAITHDRPGVTRDRMEGQVRSRGKQTFAIVDTGGI 76

Query: 61  ---------DGSE--EGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRI 109
                    +G E   G E ++ +Q+ AA+ EA  +  +VDGR GLT  DE +A HLRR 
Sbjct: 77  TLDAHAAVAEGPEGIRGFEAEILRQAEAAMAEAAGICLVVDGRDGLTPFDEHLAAHLRRA 136

Query: 110 EKPAILVVNKVDGIDA-DAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQMES 168
            KP ++VVNKVDG++  D   AEF  LG   +  ++AAHG  V  L D +     ++ E 
Sbjct: 137 GKPVLVVVNKVDGVEREDEMLAEFHALGFP-LLPVSAAHGHNVRVLEDEMREMLPDEPEE 195

Query: 169 E-QAQLEDLTNEEDPEEEQ---------LEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGK 218
           E  A  ED  + +DP   +          E  E  AE +        ++LA++GRPN GK
Sbjct: 196 EGAANGEDGDDADDPYASEGEGDANADGAESGESAAEPKGPPYDPTHLRLAMLGRPNAGK 255

Query: 219 STLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSV 278
           S+L N + G++R++V DM GTTRDS+ +  +  ++    +DTAGVRRR RI ++VE++SV
Sbjct: 256 SSLVNALTGQQRMIVSDMAGTTRDSVDVSFESGDKTITFVDTAGVRRRSRITDSVERYSV 315

Query: 279 VKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVK 338
             +L++   A+V LLV+DA + ++ QD  L+          ++ VNK D +   +   ++
Sbjct: 316 NASLKSTTKAHVTLLVLDALQGVTQQDKRLVDLLDERKTPFMVLVNKIDLVPRKLLPDLE 375

Query: 339 KELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDH 398
                 L F     + ++SA  G G+G +    +        RVGT  L R M+     H
Sbjct: 376 ASFKGMLEFCPHVPLLYVSAKSGKGLGPVLPMAERVRAECHVRVGTGQLNRAMEEVLTRH 435

Query: 399 QPPMVRGRRVKLKYAHAGGYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRI 458
           QPP+VR  R K  Y      NPP  V   N  + +   Y RY+    R+   I   P+R+
Sbjct: 436 QPPVVRRLRPKFFYLTQAETNPPTFVFFVNDADRIQTPYARYVEKALRRMFRIEHAPMRV 495

Query: 459 QFQNS 463
           +F++S
Sbjct: 496 RFRSS 500