Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., GTP-binding protein EngA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  740 bits (1910), Expect = 0.0
 Identities = 359/494 (72%), Positives = 433/494 (87%), Gaps = 7/494 (1%)

Query: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGI 60
           M+PVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYG+A L  +EFIV+DTGGI
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGI 60

Query: 61  DGSEEGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRIEKPAILVVNKV 120
           DG+EEG+ETKMA+QSLAAI+EADVVLFM D RAGLT AD +IAQHLR  +K   +V NK+
Sbjct: 61  DGTEEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVANKI 120

Query: 121 DGIDADAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQMESEQAQLEDLTNEE 180
           DGIDAD+A AEFW LG+ ++YQ+AAA GRGV  +I+  L P+AE M  E+         E
Sbjct: 121 DGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALTPYAEAMGIER-------QGE 173

Query: 181 DPEEEQLEYSEEEAEAEYKRLQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTT 240
           + E ++ +Y+EEEAEAE KRLQDLPIKLAIIG+PNVGKSTLTNRILGEERVVVYD PGTT
Sbjct: 174 EEEVDERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTT 233

Query: 241 RDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDAREN 300
           RDSIYIPM+RD REYV+IDTAGVRRR +++E +EKFSV+KTL+A+EDANVVLL++DARE 
Sbjct: 234 RDSIYIPMERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREG 293

Query: 301 ISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALH 360
           +++QDL LLGFALN+GR++VIAVNKWDG+   +K+ VK ELDRRLGF+DFARIHFISALH
Sbjct: 294 VAEQDLGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALH 353

Query: 361 GTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGGYNP 420
           GTGVGHLFES++EAY SAT RV TS+LTRIM+M+ DDHQPP+V GRRVKLKYAHAGGYNP
Sbjct: 354 GTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNP 413

Query: 421 PIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRIQFQNSENPFEGKTNKMTLSQER 480
           PI+VIHGNQV++LPDSYKRY+MNY+R+SL+++GTPI+++FQ  +NPFE K  K+T+SQER
Sbjct: 414 PIVVIHGNQVSKLPDSYKRYMMNYFRRSLKVVGTPIQLRFQEGDNPFENKVEKLTMSQER 473

Query: 481 QRKRLMSMVKNRRK 494
           +RKR +S +K+R+K
Sbjct: 474 RRKRALSHIKDRKK 487