Pairwise Alignments

Query, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., GTP-binding protein EngA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  272 bits (695), Expect = 2e-77
 Identities = 174/485 (35%), Positives = 255/485 (52%), Gaps = 23/485 (4%)

Query: 1   MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAK-LGEHEFIVIDTGG 59
           M   +ALVGRPNVGKSTLFNRL R+  A+  D PG+TRDR  G  +   +  F +IDTGG
Sbjct: 1   MFAKIALVGRPNVGKSTLFNRLIRSNRAITHDMPGVTRDRMEGIVRGRNKRPFGIIDTGG 60

Query: 60  I--DGSE---------EGVETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLRR 108
           I  DG            G E ++ +Q+  AI E   V  +VDGR GL   DE +A +LRR
Sbjct: 61  ITLDGHAAVAEGPAGIRGFEAEILRQAEEAIAECVAVCLVVDGREGLLPFDEHLASYLRR 120

Query: 109 IEKPAILVVNKVDGIDA-DAASAEFWQLGMDQMYQIAAAHGRGVGALIDRVLNPFAEQME 167
             KP ++VVNKVDGI+  D  +AEF  LG   +  ++A HG  +  L   + +   E+ E
Sbjct: 121 TGKPVLVVVNKVDGIEKEDVLTAEFHILGFPVL-AVSAEHGHNLRWLESEMRDLLPEEDE 179

Query: 168 ------SEQAQLEDLTNEEDPEEEQLEYSEEEAEAEYKRLQD---LPIKLAIIGRPNVGK 218
                 +  A    + + +   E+    SE E +   + ++D    P++L ++GRPN GK
Sbjct: 180 DGIDDDAADATAVAIADADAETEDGASASETEEDITEETVEDEPEAPLRLCMLGRPNAGK 239

Query: 219 STLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGVRRRKRINETVEKFSV 278
           S+L N + G  R++V D+ GTTRDS+ +  ++D   Y  +DTAGVRRR RI +TVE++SV
Sbjct: 240 SSLVNALTGTNRMIVSDVAGTTRDSVDVAFEKDGLSYTFVDTAGVRRRSRITDTVERYSV 299

Query: 279 VKTLQAIEDANVVLLVVDARENISDQDLSLLGFALNSGRSIVIAVNKWDGLSFDVKEHVK 338
             +L++   A+V LLV+DA E I+ QD  L+          ++ VNK D +    +E  K
Sbjct: 300 NSSLKSTTKAHVTLLVLDAVEGITSQDKRLIELLDERKTPFMVLVNKMDLVPAKAREDGK 359

Query: 339 KELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYRSATTRVGTSVLTRIMKMATDDH 398
           +     L F     + F+SA  G  +  +        R  + R+ T  L R M+     H
Sbjct: 360 RNFRDLLNFCQHVPLLFVSAKTGYELRSIVPLAARIRRECSVRIPTGQLNRAMEEVITRH 419

Query: 399 QPPMVRGRRVKLKYAHAGGYNPPIIVIHGNQVNELPDSYKRYLMNYYRKSLEIMGTPIRI 458
           QPP+VR  R K  Y       PP  V+  N  + +   Y +Y+    R+   I   P+R+
Sbjct: 420 QPPVVRRVRPKFYYMTQAESQPPTFVLFVNDADRIQAPYAKYIEKSLRRLFGIEHAPMRV 479

Query: 459 QFQNS 463
            F++S
Sbjct: 480 HFRSS 484