Pairwise Alignments

Query, 386 a.a., outer membrane protein assembly factor BamB from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., Outer membrane protein YfgL, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and NlpB) from Pseudomonas fluorescens FW300-N2E2

 Score =  246 bits (629), Expect = 6e-70
 Identities = 133/378 (35%), Positives = 206/378 (54%), Gaps = 7/378 (1%)

Query: 9   LVAAGVLALLAGCASEEENVIM-APLPIVKSEFTPKTLWSASVGDGVGHYFSKLAPDYAY 67
           L+A  +LA  AGC+S  +  +  A L   K E   +  WS S+GDG G  ++ L P    
Sbjct: 12  LLALAILA--AGCSSNSKKELPPAELTDFKEEVVLQKQWSRSIGDGQGETYNMLVPAIDG 69

Query: 68  DKVFVASRDGVVKALDPQNGKVIWTTDLEIEGSARLSGGITAAFGKLFIGSENGVVNALD 127
           D ++     GVV A+D  NG V W  DLE+     +SG +   +G + IG+  G + ALD
Sbjct: 70  DTIYAGDVTGVVMAMDRSNGDVKWEKDLELP----VSGAVGVGYGLVMIGTLKGEIVALD 125

Query: 128 AETGEPLWASAIEGEVLAAPAADNNIVIVNTSRGALIALNQEDGAQKWTISTEVPNLTLR 187
           A +GE  W + +  EVLA PA + ++V+V T    LI L+   G Q+W   +    LTLR
Sbjct: 126 ASSGEEKWRARVTSEVLAPPATNGDVVVVQTQDDRLIGLDAATGNQRWLYDSTPAVLTLR 185

Query: 188 GDSRPTAVAGGVFWGTPSGRLAAAIAERGQLIWQQPVGQPKGATEIDRLVDVDASPLVIG 247
           G S P         G  +G++ A     G  +W+Q V  P+G +E++R+VD+D   L+ G
Sbjct: 186 GTSAPIVTNRLAVAGLSTGKVVALDISNGVPVWEQRVAIPQGRSELERVVDIDGGLLLSG 245

Query: 248 GTLFTVGFNGQLIAIDLRSGQPIWKRNYSSATDMATDGSRLYLVTDKDHLVAVDTRSGTE 307
           GTL+   + G++ A+DL SG+P+W+R+ SS   +A     +Y+      +  VD RS T 
Sbjct: 246 GTLYVASYQGRVAALDLESGRPLWQRDASSYAGVAQGFGSVYVSLSSGTVEGVDERSTTA 305

Query: 308 LWSNTQLEHRLLTAPKMIDDYLVVGDAEGYLHWIDRNSGEFIAQQLVNDSGFAVGPLALN 367
           LWSN  L  R L+AP++   Y+ VGD EGYLH + +  G F+ ++ ++  G    PL + 
Sbjct: 306 LWSNDSLARRQLSAPEVFSSYVAVGDLEGYLHLLSQVDGRFVGRERIDSDGLRARPLVVG 365

Query: 368 DGYVIVTRNGQIKKLTIQ 385
           +   +   +G+++ LTI+
Sbjct: 366 NMIYVYGNSGKLEALTIK 383