Pairwise Alignments
Query, 386 a.a., outer membrane protein assembly factor BamB from Vibrio cholerae E7946 ATCC 55056
Subject, 591 a.a., Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.99.8) from Pseudomonas fluorescens FW300-N2E2
Score = 55.1 bits (131), Expect = 5e-12
Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 45/210 (21%)
Query: 83 DPQNGKVIWTTDLEIEGSARLSGGITAAFGKLFIGSENGVVNALDAETGEPLWASAIEGE 142
DP+N + I T L ++G S +N + + P+WA + GE
Sbjct: 37 DPKNPEQIVTNGLGVQGQRY---------------SPLDTLNTDNVKDLRPVWAFSFGGE 81
Query: 143 VL----AAPAADNNIVIVNTSRGALIALNQEDGAQKWTISTEVPNLTLRGDSRP------ 192
A P + ++ + S + A++ G + W +P+ D RP
Sbjct: 82 KQRGQQAQPMIKDGVMYLTGSYSRVFAVDARTGKKLWQYDARLPD-----DIRPCCDVIN 136
Query: 193 --TAVAGG-VFWGTPSGRLAAAIAERGQLIWQQPVGQPKGATEIDRLVDVDASPLVIGGT 249
A+ G VF+GT +L A + G+++W + V K I A+PL++ G
Sbjct: 137 RGVALYGDLVFFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSIS------AAPLIVNGK 190
Query: 250 LFT------VGFNGQLIAIDLRSGQPIWKR 273
L T G GQ+ A D ++G+ +W R
Sbjct: 191 LITGVAGGEFGVVGQISAYDPKNGELLWTR 220
Score = 47.0 bits (110), Expect = 1e-09
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 77 GVVKALDPQNGKVIWTTDLEIEGSARLSGGITAAFGKL-FIGSENGVVNALDAETGEPLW 135
GV++A+DP+ GK +W + A L GG+ G L F G+ G + A +A+TGE +W
Sbjct: 470 GVLRAIDPKTGKEVWRH----KNYAPLWGGVLTTKGNLVFTGTPEGFLQAFNAKTGEKVW 525
Query: 136 ASAIEGEVLAAP 147
VL +P
Sbjct: 526 EFQTGSGVLGSP 537
Score = 37.4 bits (85), Expect = 1e-06
Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 21/130 (16%)
Query: 112 GKLFIGSENGVVNALDAETGEPLWASAIEGEVLAAPAAD---------NNIVIVNTSRGA 162
G +++ V A+DA TG+ LW P D ++V T
Sbjct: 95 GVMYLTGSYSRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGDLVFFGTLDAK 154
Query: 163 LIALNQEDGAQKWT---------ISTEVPNLTLRGDSRPTAVAGGVFWGTPSGRLAAAIA 213
L+ALN++ G W+ S L + G T VAGG F G+++A
Sbjct: 155 LVALNKDTGKVVWSKKVADHKEGYSISAAPLIVNG-KLITGVAGGEFGVV--GQISAYDP 211
Query: 214 ERGQLIWQQP 223
+ G+L+W +P
Sbjct: 212 KNGELLWTRP 221
Score = 37.4 bits (85), Expect = 1e-06
Identities = 60/240 (25%), Positives = 88/240 (36%), Gaps = 49/240 (20%)
Query: 73 ASRDGVVKALDPQNGKVI----------WTTDLEIEG-----SARLSG-------GITAA 110
A R+G LD NGK I W T L+ +G A G G +
Sbjct: 348 ADRNGFFYVLDRTNGKFIRGFPFVDKITWATGLDKDGRPIYNEASRPGAPGSEAKGSSVF 407
Query: 111 FGKLFIGSENGVVNALDAETG-----EPLWASAIEGEVLAAP------AADNNIVIVNTS 159
F+G++N + A + +TG W I E +A A I +N
Sbjct: 408 VAPAFLGAKNWMPMAYNQDTGLFYVPSNEWGMDIWNEGIAYKKGAAFLGAGFTIKPLNED 467
Query: 160 R-GALIALNQEDGAQKWTISTEVPN----LTLRGDSRPTAVAGGVFWGTPSGRLAAAIAE 214
G L A++ + G + W P LT +G+ VF GTP G L A A+
Sbjct: 468 YIGVLRAIDPKTGKEVWRHKNYAPLWGGVLTTKGNL--------VFTGTPEGFLQAFNAK 519
Query: 215 RGQLIWQQPVGQPKGATEIDRLVDVDASPLVIGGTLFTVGFNGQLIA---IDLRSGQPIW 271
G+ +W+ G + I +D + V+ G V G +A D G +W
Sbjct: 520 TGEKVWEFQTGSGVLGSPITWEMDGEQYVSVVSGWGGAVPLWGGEVAKRVKDFNQGGMLW 579
Score = 33.9 bits (76), Expect = 1e-05
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 68 DKVFVASRDGVVKALDPQNGKVIWTTDL-EIEGSARLSGGITAAFGKLF---IGSENGVV 123
D VF + D + AL+ GKV+W+ + + + +S GKL G E GVV
Sbjct: 144 DLVFFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSISAAPLIVNGKLITGVAGGEFGVV 203
Query: 124 ---NALDAETGEPLWA-SAIEGEV 143
+A D + GE LW +EG +
Sbjct: 204 GQISAYDPKNGELLWTRPTVEGHM 227
Score = 33.9 bits (76), Expect = 1e-05
Identities = 43/163 (26%), Positives = 61/163 (37%), Gaps = 40/163 (24%)
Query: 41 TPKTLWSASVGDGVGHYFSKLAPDYAYDKVF--VASRD----GVVKALDPQNGKVIWTTD 94
T K +WS V D Y AP K+ VA + G + A DP+NG+++WT
Sbjct: 162 TGKVVWSKKVADHKEGYSISAAPLIVNGKLITGVAGGEFGVVGQISAYDPKNGELLWTRP 221
Query: 95 LEIEGSARLSGGITAAFGKLFIGSENGVVNALDAETGEPLWASAIEGEVLAAP------A 148
+EG G GK ENG+ +T W + AAP
Sbjct: 222 -TVEGHM----GYVYKDGK---AVENGISGGEAGKT----WPGDLWKTGGAAPWLGGYYD 269
Query: 149 ADNNIVIVNTSRGA----------------LIALNQEDGAQKW 175
+ N+++ T A +ALN +DG KW
Sbjct: 270 PETNLLLFGTGNPAPWNSHLRPGDNLYSSSRLALNPDDGTIKW 312
Score = 33.9 bits (76), Expect = 1e-05
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 22/104 (21%)
Query: 214 ERGQLIWQQPVGQPKGATEIDRLVDVDASPLVIGGTLFTV-----GFNGQLIAIDLRSGQ 268
E G IW + + KGA + G FT+ + G L AID ++G+
Sbjct: 436 EWGMDIWNEGIAYKKGAAFL--------------GAGFTIKPLNEDYIGVLRAIDPKTGK 481
Query: 269 PIWK-RNYSSATD--MATDGSRLYLVTDKDHLVAVDTRSGTELW 309
+W+ +NY+ + T G+ ++ T + L A + ++G ++W
Sbjct: 482 EVWRHKNYAPLWGGVLTTKGNLVFTGTPEGFLQAFNAKTGEKVW 525
Score = 29.6 bits (65), Expect = 2e-04
Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 20/130 (15%)
Query: 268 QPIW-------KRNYSSATDMATDGSRLYLVTDKDHLVAVDTRSGTELWS-NTQLEHRLL 319
+P+W K+ A M DG +YL + AVD R+G +LW + +L +
Sbjct: 71 RPVWAFSFGGEKQRGQQAQPMIKDGV-MYLTGSYSRVFAVDARTGKKLWQYDARLPDDIR 129
Query: 320 TAPKMID-------DYLVVGDAEGYLHWIDRNSGEFIAQQLVND--SGFAV--GPLALND 368
+I+ D + G + L +++++G+ + + V D G+++ PL +N
Sbjct: 130 PCCDVINRGVALYGDLVFFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSISAAPLIVNG 189
Query: 369 GYVIVTRNGQ 378
+ G+
Sbjct: 190 KLITGVAGGE 199