Pairwise Alignments

Query, 386 a.a., outer membrane protein assembly factor BamB from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., outer membrane assembly lipoprotein YfgL from Pseudomonas stutzeri RCH2

 Score =  245 bits (626), Expect = 1e-69
 Identities = 136/371 (36%), Positives = 206/371 (55%), Gaps = 5/371 (1%)

Query: 17  LLAGCASEE-ENVIMAPLPIVKSEFTPKTLWSASVGDGVGHYFSKLAPDYAYDKVFVASR 75
           L AGC+S++ +    A L   K+E + K  WS S+GDG G  ++ L P    D+++ A  
Sbjct: 15  LAAGCSSKDTKEAEPAELVKFKAEVSLKKEWSRSIGDGQGKTYNLLTPVVYGDQIYAADV 74

Query: 76  DGVVKALDPQNGKVIWTTDLEIEGSARLSGGITAAFGKLFIGSENGVVNALDAETGEPLW 135
           +G+V ++D   GKV W   L+      +SG + A +G + +G+  G V ALD  TGE  W
Sbjct: 75  EGLVVSMDRLTGKVNWKKKLD----KPVSGAVGAGYGLVLVGTLRGEVLALDVSTGEERW 130

Query: 136 ASAIEGEVLAAPAADNNIVIVNTSRGALIALNQEDGAQKWTISTEVPNLTLRGDSRPTAV 195
            S +  EVLAAPA + +IV+V T    LIAL  + GAQ+W+  +    LTLRG   P   
Sbjct: 131 RSQVSSEVLAAPAVNGDIVLVQTQDDRLIALEIDTGAQRWSYESSPAVLTLRGTGAPLLT 190

Query: 196 AGGVFWGTPSGRLAAAIAERGQLIWQQPVGQPKGATEIDRLVDVDASPLVIGGTLFTVGF 255
                 G  SG++ A    RG  +W+Q V  P+G +E++R+VD+D   L+ GGTL+   +
Sbjct: 191 NQLAVAGLSSGKVVALDTRRGLPVWEQRVAIPQGRSELERVVDIDGGLLLSGGTLYVASY 250

Query: 256 NGQLIAIDLRSGQPIWKRNYSSATDMATDGSRLYLVTDKDHLVAVDTRSGTELWSNTQLE 315
            G+  A++L SG+ +W+R+ SS +  A     +YL      +  +D RS T LW N  L 
Sbjct: 251 QGRAAALELESGRILWQRDASSYSGAALGYGSVYLSLADGTVEGIDERSTTALWRNDSLA 310

Query: 316 HRLLTAPKMIDDYLVVGDAEGYLHWIDRNSGEFIAQQLVNDSGFAVGPLALNDGYVIVTR 375
            R L+AP +   Y+VVGD EGYLH + +  G F+A++ ++ SG    P+   D       
Sbjct: 311 RRQLSAPAVFSSYVVVGDIEGYLHLLSQVDGRFVARERIDSSGVRARPVVEGDWLYAFGN 370

Query: 376 NGQIKKLTIQQ 386
           +G++  LTI+Q
Sbjct: 371 DGKLVALTIRQ 381