Pairwise Alignments

Query, 386 a.a., outer membrane protein assembly factor BamB from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., outer membrane assembly lipoprotein YfgL from Dechlorosoma suillum PS

 Score =  203 bits (517), Expect = 6e-57
 Identities = 117/389 (30%), Positives = 191/389 (49%), Gaps = 17/389 (4%)

Query: 5   FNQVLVAAGVLALLAGCASEEE--------NVIMAPLPIVKSEFTPKTLWSASVGDGVGH 56
           F   L++  + A L GC+S ++         V MA L  +K      +LW    G    +
Sbjct: 3   FRPALLSLLLAAALGGCSSLDKINPFASSSKVKMAELDTIKPSVNVVSLWQGRAGKAEDY 62

Query: 57  YFSKLAPDYAYDKVFVASRDGVVKALDPQNGKVIWTTDLEIEGSARLSGGITAAFGKLFI 116
            F+    D     V+VA+ +G V   D  +GK  W    ++     LSGG+ +    + +
Sbjct: 63  VFTPAVVD---SSVYVAANNGSVTRFD--DGKQAW----QVSAGQPLSGGVGSDGRLVVV 113

Query: 117 GSENGVVNALDAETGEPLWASAIEGEVLAAPAADNNIVIVNTSRGALIALNQEDGAQKWT 176
           G+  G + A DA+ G+ LW +    ++LAA A   +IV+V T    L   +  DG +KW 
Sbjct: 114 GTPKGEIIAFDAKDGKQLWKARASSDILAAAAVSADIVVVRTGDNRLYGFDPADGKRKWV 173

Query: 177 ISTEVPNLTLRGDSRPTAVAGGVFWGTPSGRLAAAIAERGQLIWQQPVGQPKGATEIDRL 236
                P L+LR  + P      VF G P G+L A   + G  +W+  V  PKG TE+DR+
Sbjct: 174 YQRNNPALSLRNAAPPVISERYVFAGFPGGKLVAVSLQNGAAVWEGTVALPKGTTELDRV 233

Query: 237 VDVDASPLVIGGTLFTVGFNGQLIAIDLRSGQPIWKRNYSSATDMATDGSRLYLVTDKDH 296
            D+ + P+  G  +  V + G++   DL +G  IW R+ SSA+ +A D   +Y+  DK  
Sbjct: 234 ADITSPPVFDGPQVCAVAYQGRVACFDLTNGNLIWARDMSSASGLAMDSRNIYVADDKGA 293

Query: 297 LVAVDTRSGTELWSNTQLEHRLLTAPKMIDDYLVVGDAEGYLHWIDRNSGEFIAQQLVND 356
           + A+D   GT LW   +L  R L+ P++    + VGD +G +H+++R+ G F A+   + 
Sbjct: 294 VHALDRFRGTSLWKQDKLFLRQLSMPRVAHGLVAVGDVKGVIHFLNRDDGSFSARFTTDG 353

Query: 357 SGFAVGPLALNDGYVIVTRNGQIKKLTIQ 385
           +     P +   G++  T+ G +  L +Q
Sbjct: 354 TAVVAAPQSYGSGWLFQTQGGGVFALDVQ 382