Pairwise Alignments

Query, 386 a.a., outer membrane protein assembly factor BamB from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., outer membrane protein assembly factor BamB from Pantoea sp. MT58

 Score =  335 bits (860), Expect = 1e-96
 Identities = 161/379 (42%), Positives = 243/379 (64%), Gaps = 10/379 (2%)

Query: 15  LALLAGCA---SEEENVIMAPLPIVKSEFTPKTLWSASVGDGVGHYFSKLAPDYAYDKVF 71
           + LL+GC+    EE+ V MAPLP V+++FTP+ +WS SVGDGVG ++S L P +  + V+
Sbjct: 14  VTLLSGCSLFSGEEDVVKMAPLPKVENQFTPQKVWSTSVGDGVGDFYSNLHPAWQDNTVY 73

Query: 72  VASRDGVVKALDPQNGKVIWTTDLEIEG-------SARLSGGITAAFGKLFIGSENGVVN 124
            A R G+VKALD  +GK  W  DL  +        SA LSGG+TA   ++++GSE G V 
Sbjct: 74  AADRFGIVKALDAADGKEKWKVDLSEKTGFFSKNISALLSGGLTADGDRIYVGSERGQVF 133

Query: 125 ALDAETGEPLWASAIEGEVLAAPAADNNIVIVNTSRGALIALNQEDGAQKWTISTEVPNL 184
           AL++  G   W + + GE L+ P   + +V+++TS G L  L+Q  G  KW+++ ++P L
Sbjct: 134 ALNSSDGSVAWQTKVAGEALSRPVVSDGLVLIHTSNGMLQGLDQSSGVVKWSVNLDMPAL 193

Query: 185 TLRGDSRPTAVAGGVFWGTPSGRLAAAIAERGQLIWQQPVGQPKGATEIDRLVDVDASPL 244
           +LRG+S P    GG   G  +GR++A    +GQLIWQQ + Q  GATEIDRL DVD +P+
Sbjct: 194 SLRGESAPAVAFGGAIVGGDNGRVSAVAMNQGQLIWQQRISQVSGATEIDRLNDVDTTPV 253

Query: 245 VIGGTLFTVGFNGQLIAIDLRSGQPIWKRNYSSATDMATDGSRLYLVTDKDHLVAVDTRS 304
           ++ G ++ + +NG L A+DLRSGQ +WKR      D+  D  R+YLV   D ++A++T  
Sbjct: 254 IVNGVVYALAYNGNLSALDLRSGQILWKREIGGVKDLIVDAGRIYLVDQDDRVIALNTDG 313

Query: 305 GTELWSNTQLEHRLLTAPKMIDDYLVVGDAEGYLHWIDRNSGEFIAQQLVNDSGFAVGPL 364
           G  +W  + L HR LT+P + + YL+VGD+EGYLHW++   G F+AQQ ++ SGF   P+
Sbjct: 314 GVAIWRQSDLLHRNLTSPVLYNGYLIVGDSEGYLHWLNTTDGRFVAQQELDSSGFQTEPV 373

Query: 365 ALNDGYVIVTRNGQIKKLT 383
             +D  +I +++G++  +T
Sbjct: 374 VASDKLLIQSKDGEVYAIT 392