Pairwise Alignments

Query, 422 a.a., histidine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., Histidyl-tRNA synthetase, class IIa (NCBI) from Rhodospirillum rubrum S1H

 Score =  355 bits (911), Expect = e-102
 Identities = 193/416 (46%), Positives = 264/416 (63%), Gaps = 8/416 (1%)

Query: 5   IQAIRGMNDCLPTQSPLWQKVEGVVKNVISAYGYSEVRMPIVEMTHLFSRAIGEVTDVVE 64
           +Q +RG +D LP ++   + VE   + V   +G+ E+  PI E T +F+R +G+ +DVV 
Sbjct: 4   LQPVRGTHDYLPDEARSHRHVEETARTVAERFGFGEIITPIFEFTDVFARTLGDTSDVVT 63

Query: 65  KEMYTFEDRNGDSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHERPQKGRYRQ 124
           KEMYTF DR+GDSLTLRPE TAG  R+ I  GL  N   +L+Y GPMFRHERPQKGR RQ
Sbjct: 64  KEMYTFTDRSGDSLTLRPENTAGVARAFISGGLAQNVPVKLFYRGPMFRHERPQKGRLRQ 123

Query: 125 FHQCGVEVFGLDGPDVDAELIMMTARLWRELGIAQHVRLELNSIGSLEARANYRTALIDY 184
           FHQ GVE+ G + P  D E+I + ++L   LG+     L LNS+G  E+R  YR AL+ Y
Sbjct: 124 FHQVGVELIGAENPLADVEVIALGSQLLGALGVGGRTILHLNSLGDPESREAYRAALVSY 183

Query: 185 LEQYQNVLDEDCKRRMYTNPLRVLDSKNPDVQAILGDAPQLSDYLDAESKQHFAGLCELL 244
           L  +++ L  D   R+  NPLRVLDSK+   +A++  AP+L D+L+  S+  FAG+   L
Sbjct: 184 LSGHRDSLSRDSLERLERNPLRVLDSKDEGDRAVVAGAPRLIDHLNEASRAFFAGVTGGL 243

Query: 245 DAAGIEYTVNQRLVRGLDYYNRTVFEWITESLGSQGTVCGGGRYDGLVEQLGGKPTPAVG 304
           +A GI + ++  LVRGLDYY  T FE++T  LG+QGTV  GGRYDGL+ Q+GG  TP VG
Sbjct: 244 EALGIPFEIDPLLVRGLDYYGHTAFEFVTTDLGAQGTVMAGGRYDGLIRQMGGSQTPGVG 303

Query: 305 FAMGLERLVLMMETLGNTDVRRSVDVYMVTAGEGTMMAGMKLAEQLREQVPGLRVMTHFG 364
           +A G+ERL ++M       V     + M+ AG    +  +KLA  LR+   GL V   FG
Sbjct: 304 WAAGVERLSMLMAA---DRVGAPRPLAMIPAGPDDEVEALKLAHALRQ--GGLFV--DFG 356

Query: 365 -GGNFKKQFKRADKVGAAIALVLGEDEVAAQTVVVKDLAGGEQNTVAQAEVAKLLA 419
             GN  K+ KRA+++ A  A++LG +E A  TVVV+DL  GEQ T+  A + + LA
Sbjct: 357 YSGNLGKRMKRANRINARAAIILGGEERANGTVVVRDLDSGEQETIGLAVLEEFLA 412