Pairwise Alignments

Query, 422 a.a., histidine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., histidyl-tRNA synthetase HisS from Phaeobacter inhibens DSM 17395

 Score =  115 bits (289), Expect = 2e-30
 Identities = 113/428 (26%), Positives = 182/428 (42%), Gaps = 54/428 (12%)

Query: 29  VKNVISAYGYSEVRMPIVEMTHLFSRAIGEVTDVVEKEMYTFEDR----NGDSLTLRPEG 84
           +  V   YG+  +    VE      + + +V D   + ++ +++     NGD + LR + 
Sbjct: 36  IAGVYHRYGFDALESSAVETVEALGKFLPDV-DRPNEGVFAWQEYDEGGNGDWMALRYDL 94

Query: 85  TAGCVRSGIENGLLYNQEQRLWYMGPMFRHERPQKGRYRQFHQCGVEVFGLDGPDVDAEL 144
           TA   R   ++        R + MGP++R+E+P  GRYRQF+QC  +  G      DAE+
Sbjct: 95  TAPLARVYAQHRNDLPTPYRRYAMGPVWRNEKPGPGRYRQFYQCDADTVGTASMAADAEI 154

Query: 145 IMMTARLWRELGIAQ-------HVRLELNSI---GSLEARANYRTALIDYLEQYQNVLDE 194
             M +     +GI +       + R  LN +     LEA    R  ++  ++++  V  E
Sbjct: 155 CAMLSDTLETVGIPRGDYLVRVNNRKVLNGVLEAMGLEAGDAKRDDVLRTIDKFDKV-GE 213

Query: 195 DCKRRMYTNP----------------------LRVLDSKNPDVQAILGDAPQL--SDYLD 230
              R + T                        L  L SK  D    L +  +   S  + 
Sbjct: 214 AGVRELLTKGRLDASGAFIDGVGLSDDQAAPVLAFLTSKGADAAKTLANLSEAVGSSSIG 273

Query: 231 AESKQHFAGLCELLDAAGI---EYTVNQRLVRGLDYYNRTVFEW-----ITESLGSQ--- 279
           AE       + +LL A G       ++  +VRGL YY   V+E      I +  G +   
Sbjct: 274 AEGVGELEQIGDLLAAGGYGADRIDIDPSVVRGLGYYTGPVYEAELTFEILDEKGRKRQF 333

Query: 280 GTVCGGGRYDGLVEQLGGKPTPAVGFAMGLERLVLMMETLGNTDVRRSVDVYMVTAGEGT 339
           G+V GGGRYD LV++  G+  PA G ++G++RL+  +   G      +  V +    +  
Sbjct: 334 GSVSGGGRYDDLVKRFTGQEVPATGVSIGVDRLLAALREKGRIKAEATGPVVVTVMDKAR 393

Query: 340 MMAGMKLAEQLREQVPGLRVMTHFGG-GNFKKQFKRADKVGAAIALVLGEDEVAAQTVVV 398
           M     +  +LR    G+R   + G   NF  Q K ADK  + IA++ G +E     V +
Sbjct: 394 MADYQAMVAELRN--AGIRAEVYLGNPKNFGNQLKYADKRNSPIAVIEGGEEKDRGVVQI 451

Query: 399 KDLAGGEQ 406
           KDL  G Q
Sbjct: 452 KDLILGAQ 459