Pairwise Alignments

Query, 422 a.a., histidine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., histidyl-tRNA synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  342 bits (878), Expect = 1e-98
 Identities = 192/414 (46%), Positives = 253/414 (61%), Gaps = 11/414 (2%)

Query: 5   IQAIRGMNDCLPTQSPLWQKVEGVVKNVISAYGYSEVRMPIVEMTHLFSRAIGEVTDVVE 64
           +  I+G  D     S ++  +E   + V   YGY+E+R P++E T LF R+IG  TDVV+
Sbjct: 18  VGTIKGFADMFSPDSDVFTFMENTAREVFGRYGYAELRTPLLERTELFCRSIGTETDVVQ 77

Query: 65  KEMYTFEDRNGDSLTLRPEGTAGCVRSGIENGLLYNQE--QRLWYMGPMFRHERPQKGRY 122
           KEMYTF DR G SLTLRPE TAG +R+ I+ G  + QE   +L+  GPMFR+ERPQKGR 
Sbjct: 78  KEMYTFPDRKGRSLTLRPEATAGVMRAFIDAGR-HAQEPVSKLFTTGPMFRYERPQKGRM 136

Query: 123 RQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIAQHVRLELNSIGSLEARANYRTALI 182
           RQFHQ   E  G   P  DAEL++M     RELG+   + L++NS+G  E R  YR AL 
Sbjct: 137 RQFHQINCECLGPQEPQADAELVLMLMTFLRELGLTD-LSLQVNSLGCRECRPVYRAALR 195

Query: 183 DYLEQY-QNVLDEDCKRRMYTNPLRVLDSKNPDVQAILGDAPQLSDYLDAESKQHFAGLC 241
           D+L+   +  L EDC+RR+ TNPLRVLD K P  + +  +AP++ D+   E + HF  + 
Sbjct: 196 DFLDSIDRESLCEDCRRRIDTNPLRVLDCKVPTCRELTAEAPRIIDHNCPECRSHFDTVL 255

Query: 242 ELLDAAGIEYTVNQRLVRGLDYYNRTVFEWITESLGSQGTVCGGGRYDGLVEQLGGKPTP 301
            + DAA + Y +  RLVRGLDYYNRT FE ++ S+G+Q +V GGGRYDGLV QLGG   P
Sbjct: 256 RVFDAAQLPYVLTPRLVRGLDYYNRTTFEVVSGSIGAQSSVAGGGRYDGLVAQLGGPDVP 315

Query: 302 AVGFAMGLERLVLMMETLGNTDVRRSVDVYMVTAGEGTMMAGMKLAEQLREQVPGLRVMT 361
            VGFA G+ERL LMM  L     ++  D Y+         A M LA++LR    G     
Sbjct: 316 GVGFACGMERLALMMPAL----EKKRPDFYIAVLDPAAADAAMLLAQELR--AAGKAGEV 369

Query: 362 HFGGGNFKKQFKRADKVGAAIALVLGEDEVAAQTVVVKDLAGGEQNTVAQAEVA 415
            F     K Q ++A + GA   L+LG DE+A  TVV+KD+  GEQ +V Q E A
Sbjct: 370 SFAARGIKGQMRQAGRTGARCTLLLGGDEMANGTVVIKDMDSGEQRSVPQGEAA 423