Pairwise Alignments

Query, 422 a.a., histidine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., histidine--tRNA ligase from Methanococcus maripaludis JJ

 Score =  159 bits (401), Expect = 2e-43
 Identities = 116/424 (27%), Positives = 199/424 (46%), Gaps = 22/424 (5%)

Query: 6   QAIRGMNDCLPTQSPLWQKVEGVVKNVISAYGYSEVRMPIVEMTHLFSRAIGEVTDVVEK 65
           Q  +G  D LP +    + +E  ++ V  +Y +SE+  P  E   L S+  G   D +  
Sbjct: 3   QKPKGTRDFLPEEMKKRKTIEKKLRKVFDSYNFSEINTPTFESFELLSKKTG---DEIRT 59

Query: 66  EMYTFEDRNGDSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHERPQKGRYRQF 125
           +++ F D     + LRPE T+   R  I       +  +L+Y    FR+E PQ GRYR+F
Sbjct: 60  QLFVFRDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREF 119

Query: 126 HQCGVEVFGLDGPDVDAELIMMTARLWRELGIAQHVRLELNSIGSLEARANYRTALIDYL 185
            Q G E+ G   P  DAE++ M     +E+ +     + +  +G L+          D  
Sbjct: 120 WQMGSELIGSKKPIADAEVVNMAIEGLKEINM--DFEIHIGHLGVLKGVFEKYNLSDDEG 177

Query: 186 EQYQNVLDEDCKRRMYTNPLRVLDSKNPDVQAILGDA----------PQLSDYL-DAESK 234
            + + ++D++    + +   R+   KN ++   + +           P L + L D ES 
Sbjct: 178 NEIRRLIDKEDMDGLKSALGRIESEKNIEISKKVFEVLDLKGGKEVIPILKEKLADFESS 237

Query: 235 -QHFAGLCELLDAAGIEYTVNQRLVRGLDYYNRTVFEWITESLGSQGTVCGGGRYDGLVE 293
                 L  +L+    +Y +N  + RGLDYY   VFE   +  G++  VCGGGRYD L+E
Sbjct: 238 VAALENLDSILEFVPHDYVINFGIARGLDYYTGMVFEVYGKKEGAR-QVCGGGRYDNLIE 296

Query: 294 QLGGKPTPAVGFAMGLERLVLMMETLGNTDVRRSVDVYMVTAGEGTMMAGMKLAEQLREQ 353
              G+P+PAVGFA G +R++L ++     +   S+ V  V + E  +   +K+A+ LR+ 
Sbjct: 297 LFEGEPSPAVGFAYGFDRIMLNIDDFEVEN--ESIFVVPVKSSEMLLKECLKIAKTLRDS 354

Query: 354 VPGLRVMTHFGGGNFKKQFKRADKVGAAIALVLGEDEVAAQTVVVKDLAGGEQNTVAQAE 413
             G  V     G    K    A+       L++GE+++    V +K++  GEQ+ +   +
Sbjct: 355 --GKSVEVDLMGRKLNKALNYANTKNIKKVLIVGENDIMTGKVSLKNMETGEQSLIELND 412

Query: 414 VAKL 417
           +  +
Sbjct: 413 ILNI 416