Pairwise Alignments

Query, 422 a.a., histidine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., histidyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  578 bits (1491), Expect = e-170
 Identities = 288/423 (68%), Positives = 342/423 (80%), Gaps = 2/423 (0%)

Query: 1   MAKTIQAIRGMNDCLPTQSPLWQKVEGVVKNVISAYGYSEVRMPIVEMTHLFSRAIGEVT 60
           MAK IQAIRGMND LPTQSPLWQKVE V+++ ++AYGYSE+R PIVE T LF R+IGEVT
Sbjct: 1   MAKQIQAIRGMNDILPTQSPLWQKVEAVLRSSVAAYGYSEIRTPIVENTDLFKRSIGEVT 60

Query: 61  DVVEKEMYTFEDRNGDSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHERPQKG 120
           D+VEKEMYTFEDRNGDSLTLRPEGTA  VR+G E+GLLYNQEQRLWYMGPMFRHERPQKG
Sbjct: 61  DIVEKEMYTFEDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHERPQKG 120

Query: 121 RYRQFHQCGVEVFGLDGPDVDAELIMMTARLWRELGIAQHVRLELNSIGSLEARANYRTA 180
           RYRQFHQ GVE++G+   D+DAE++M++ARLW +LGI +HV LELN++G    RA YR A
Sbjct: 121 RYRQFHQFGVEIYGIGSADIDAEVLMLSARLWEKLGITEHVTLELNTLGDPAERAAYREA 180

Query: 181 LIDYLEQYQNVLDEDCKRRMYTNPLRVLDSKNPDVQAILGDAPQLSDYLDAESKQHFAGL 240
           LI +LEQ+++ LDED +RRMY+NPLRVLDSK+P VQ+IL DAP L DYL  ES QHFA L
Sbjct: 181 LIAFLEQHKDKLDEDSQRRMYSNPLRVLDSKDPQVQSILADAPALMDYLGEESSQHFAQL 240

Query: 241 CELLDAAGIEYTVNQRLVRGLDYYNRTVFEWITESLGSQGTVCGGGRYDGLVEQLGGKPT 300
            ELLDA GI+Y VN RLVRGLDYYNRTVFEW+T SLGSQGTV  GGRYDGLV QLGGK T
Sbjct: 241 RELLDAVGIQYRVNSRLVRGLDYYNRTVFEWVTNSLGSQGTVLAGGRYDGLVAQLGGKET 300

Query: 301 PAVGFAMGLERLVLMMETLGNT-DVRRSVDVYMVTAGEGTMMAGMKLAEQLREQVPGLRV 359
           PAVGFAMGLER+VL++ETL  T D+   VDVY+   G+  ++  +K+A++LR  +P LRV
Sbjct: 301 PAVGFAMGLERIVLLLETLALTQDIPAEVDVYVAAMGDNCLVEAIKVAQELRSALPTLRV 360

Query: 360 MTHFGGGNFKKQFKRADKVGAAIALVLGEDEVAAQTVVVKDLAG-GEQNTVAQAEVAKLL 418
           M+H GGGN KKQ KRADK GA +AL++GE+E+A   V VK L    EQ  VA+  ++  L
Sbjct: 361 MSHCGGGNLKKQMKRADKSGAQVALLIGEEELAEGVVTVKYLRNDNEQQRVARNALSAFL 420

Query: 419 AHL 421
           A L
Sbjct: 421 AEL 423